Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 RNU6-1076P-201ENST00000410397 104 ntBASIC0.7□□□□□ -2.3
NKX2-2O95096 RNU6-355P-201ENST00000410427 104 ntBASIC0.7□□□□□ -2.3
NKX2-2O95096 RNU6-791P-201ENST00000410467 104 ntBASIC0.7□□□□□ -2.3
NKX2-2O95096 RNU6-705P-201ENST00000410601 104 ntBASIC0.7□□□□□ -2.3
NKX2-2O95096 RNU6-1100P-201ENST00000410691 104 ntBASIC0.7□□□□□ -2.3
NKX2-2O95096 RNU6-860P-201ENST00000410860 104 ntBASIC0.7□□□□□ -2.3
NKX2-2O95096 RNU6-1217P-201ENST00000411276 104 ntBASIC0.7□□□□□ -2.3
NKX2-2O95096 RNU6-785P-201ENST00000411324 104 ntBASIC0.7□□□□□ -2.3
NKX2-2O95096 AC004941.2-201ENST00000427009 228 ntBASIC0.7□□□□□ -2.3
NKX2-2O95096 RNU7-197P-201ENST00000458836 62 ntBASIC0.7□□□□□ -2.3
NKX2-2O95096 RNU7-102P-201ENST00000458948 62 ntBASIC0.7□□□□□ -2.3
NKX2-2O95096 RNU7-113P-201ENST00000459273 62 ntBASIC0.7□□□□□ -2.3
NKX2-2O95096 AC090897.1-201ENST00000580909 226 ntBASIC0.7□□□□□ -2.3
NKX2-2O95096 U6.90-201ENST00000614007 104 ntBASIC0.7□□□□□ -2.3
NKX2-2O95096 U6.70-201ENST00000620287 104 ntBASIC0.7□□□□□ -2.3
NKX2-2O95096 MIR6866-201ENST00000638146 69 ntBASIC0.7□□□□□ -2.3
NKX2-2O95096 RNU6-151P-201ENST00000364158 107 ntBASIC0.69□□□□□ -2.3
NKX2-2O95096 RNU6-1130P-201ENST00000365434 107 ntBASIC0.69□□□□□ -2.3
NKX2-2O95096 U8.15-201ENST00000390947 134 ntBASIC0.69□□□□□ -2.3
NKX2-2O95096 SNORD93-201ENST00000408813 74 ntBASIC0.69□□□□□ -2.3
NKX2-2O95096 AC108059.2-201ENST00000434626 151 ntBASIC0.69□□□□□ -2.3
NKX2-2O95096 RPL39P25-201ENST00000449384 154 ntBASIC0.69□□□□□ -2.3
NKX2-2O95096 RNU6-240P-201ENST00000516098 97 ntBASIC0.69□□□□□ -2.3
NKX2-2O95096 Y_RNA.686-201ENST00000516548 134 ntBASIC0.69□□□□□ -2.3
NKX2-2O95096 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.69□□□□□ -2.3
NKX2-2O95096 AC133485.4-201ENST00000561835 220 ntBASIC0.69□□□□□ -2.3
NKX2-2O95096 AC138907.4-201ENST00000570107 226 ntBASIC0.69□□□□□ -2.3
NKX2-2O95096 MIR3671-201ENST00000580455 88 ntBASIC0.69□□□□□ -2.3
NKX2-2O95096 HSBP1P2-201ENST00000299671 229 ntBASIC0.68□□□□□ -2.3
NKX2-2O95096 RNY1P13-201ENST00000365030 105 ntBASIC0.68□□□□□ -2.3
NKX2-2O95096 RNU4-45P-201ENST00000365469 141 ntBASIC0.68□□□□□ -2.3
NKX2-2O95096 Y_RNA.470-201ENST00000384307 117 ntBASIC0.68□□□□□ -2.3
NKX2-2O95096 RNU2-35P-201ENST00000516446 142 ntBASIC0.68□□□□□ -2.3
NKX2-2O95096 Y_RNA.690-201ENST00000516603 95 ntBASIC0.68□□□□□ -2.3
NKX2-2O95096 RNU7-35P-201ENST00000517174 62 ntBASIC0.68□□□□□ -2.3
NKX2-2O95096 MIR3144-201ENST00000579460 79 ntBASIC0.68□□□□□ -2.3
NKX2-2O95096 AC008608.1-201ENST00000603910 127 ntBASIC0.68□□□□□ -2.3
NKX2-2O95096 MIR8066-201ENST00000617280 78 ntBASIC0.68□□□□□ -2.3
NKX2-2O95096 Y_RNA.42-201ENST00000362660 108 ntBASIC0.67□□□□□ -2.3
NKX2-2O95096 Y_RNA.150-201ENST00000363562 102 ntBASIC0.67□□□□□ -2.3
NKX2-2O95096 RNU6-309P-201ENST00000364573 106 ntBASIC0.67□□□□□ -2.3
NKX2-2O95096 SNORD116-18-201ENST00000383961 92 ntBASIC0.67□□□□□ -2.3
NKX2-2O95096 Y_RNA.555-201ENST00000384673 110 ntBASIC0.67□□□□□ -2.3
NKX2-2O95096 SNORD100-201ENST00000408573 76 ntBASIC0.67□□□□□ -2.3
NKX2-2O95096 RNU4-83P-201ENST00000410863 133 ntBASIC0.67□□□□□ -2.3
NKX2-2O95096 AC096949.1-201ENST00000412047 152 ntBASIC0.67□□□□□ -2.3
NKX2-2O95096 AL512326.2-201ENST00000426359 151 ntBASIC0.67□□□□□ -2.3
NKX2-2O95096 AC004812.1-201ENST00000540773 146 ntBASIC0.67□□□□□ -2.3
NKX2-2O95096 AC021443.1-201ENST00000604478 211 ntBASIC0.67□□□□□ -2.3
NKX2-2O95096 MIR8070-201ENST00000616510 88 ntBASIC0.67□□□□□ -2.3
NKX2-2O95096 Y_RNA.4-201ENST00000362333 112 ntBASIC0.66□□□□□ -2.3
NKX2-2O95096 RNU6-508P-201ENST00000363231 103 ntBASIC0.66□□□□□ -2.3
NKX2-2O95096 RNU6-804P-201ENST00000384286 107 ntBASIC0.66□□□□□ -2.3
NKX2-2O95096 Y_RNA.531-201ENST00000384589 121 ntBASIC0.66□□□□□ -2.3
NKX2-2O95096 Y_RNA.588-201ENST00000391254 102 ntBASIC0.66□□□□□ -2.3
NKX2-2O95096 RNA5SP222-201ENST00000411039 105 ntBASIC0.66□□□□□ -2.3
NKX2-2O95096 RNU7-79P-201ENST00000516082 62 ntBASIC0.66□□□□□ -2.3
NKX2-2O95096 RNA5SP33-201ENST00000516687 98 ntBASIC0.66□□□□□ -2.3
NKX2-2O95096 MIR3612-201ENST00000579753 87 ntBASIC0.66□□□□□ -2.3
NKX2-2O95096 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
NKX2-2O95096 MIR18A-201ENST00000362310 71 ntBASIC0.65□□□□□ -2.31
NKX2-2O95096 MIR146A-201ENST00000385201 99 ntBASIC0.65□□□□□ -2.31
NKX2-2O95096 AP003327.1-201ENST00000529684 127 ntBASIC0.65□□□□□ -2.31
NKX2-2O95096 MIR6504-201ENST00000613520 61 ntBASIC0.65□□□□□ -2.31
NKX2-2O95096 SNORD114-22-201ENST00000365423 72 ntBASIC0.64□□□□□ -2.31
NKX2-2O95096 MIR513C-201ENST00000401352 84 ntBASIC0.64□□□□□ -2.31
NKX2-2O95096 AL606490.4-201ENST00000423117 127 ntBASIC0.64□□□□□ -2.31
NKX2-2O95096 RNU7-164P-201ENST00000459221 62 ntBASIC0.64□□□□□ -2.31
NKX2-2O95096 AC002350.1-201ENST00000490759 375 ntBASIC0.64□□□□□ -2.31
NKX2-2O95096 RNU6-448P-201ENST00000517052 107 ntBASIC0.64□□□□□ -2.31
NKX2-2O95096 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.64□□□□□ -2.31
NKX2-2O95096 MIR6835-201ENST00000621552 64 ntBASIC0.64□□□□□ -2.31
NKX2-2O95096 Y_RNA.398-201ENST00000383952 99 ntBASIC0.63□□□□□ -2.31
NKX2-2O95096 Y_RNA.400-201ENST00000383963 111 ntBASIC0.63□□□□□ -2.31
NKX2-2O95096 MIR520E-201ENST00000384867 87 ntBASIC0.63□□□□□ -2.31
NKX2-2O95096 RNU6-460P-201ENST00000391158 108 ntBASIC0.63□□□□□ -2.31
NKX2-2O95096 RNU7-123P-201ENST00000515911 60 ntBASIC0.63□□□□□ -2.31
NKX2-2O95096 RNU6-765P-201ENST00000516916 99 ntBASIC0.63□□□□□ -2.31
NKX2-2O95096 MIR4491-201ENST00000581087 68 ntBASIC0.63□□□□□ -2.31
NKX2-2O95096 MIR548AE2-201ENST00000583456 67 ntBASIC0.63□□□□□ -2.31
NKX2-2O95096 MIR6082-201ENST00000613604 109 ntBASIC0.63□□□□□ -2.31
NKX2-2O95096 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.63□□□□□ -2.31
NKX2-2O95096 Y_RNA.180-201ENST00000363867 113 ntBASIC0.62□□□□□ -2.31
NKX2-2O95096 Y_RNA.298-201ENST00000364960 107 ntBASIC0.62□□□□□ -2.31
NKX2-2O95096 Y_RNA.366-201ENST00000365540 102 ntBASIC0.62□□□□□ -2.31
NKX2-2O95096 CYP3A137P-201ENST00000562436 69 ntBASIC0.62□□□□□ -2.31
NKX2-2O95096 MIR548X2-201ENST00000579776 100 ntBASIC0.62□□□□□ -2.31
NKX2-2O95096 AP001340.1-201ENST00000624405 217 ntBASIC0.62□□□□□ -2.31
NKX2-2O95096 Y_RNA.8-201ENST00000362353 102 ntBASIC0.61□□□□□ -2.31
NKX2-2O95096 Y_RNA.13-201ENST00000362403 112 ntBASIC0.61□□□□□ -2.31
NKX2-2O95096 RNU6-915P-201ENST00000364943 103 ntBASIC0.61□□□□□ -2.31
NKX2-2O95096 Y_RNA.299-201ENST00000364973 94 ntBASIC0.61□□□□□ -2.31
NKX2-2O95096 SNORA36.2-201ENST00000384004 127 ntBASIC0.61□□□□□ -2.31
NKX2-2O95096 SNORA32-201ENST00000384072 121 ntBASIC0.61□□□□□ -2.31
NKX2-2O95096 MIR140-201ENST00000385282 100 ntBASIC0.61□□□□□ -2.31
NKX2-2O95096 MIR3121-201ENST00000579680 77 ntBASIC0.61□□□□□ -2.31
NKX2-2O95096 AL590095.2-201ENST00000604136 117 ntBASIC0.61□□□□□ -2.31
NKX2-2O95096 AC108081.1-201ENST00000604358 221 ntBASIC0.61□□□□□ -2.31
NKX2-2O95096 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.6□□□□□ -2.31
NKX2-2O95096 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms