Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 MIR548AI-201ENST00000579940 88 ntBASIC1.01□□□□□ -2.25
PRKNO60260 MIR4305-201ENST00000583252 102 ntBASIC1.01□□□□□ -2.25
PRKNO60260 MIR4295-201ENST00000585286 85 ntBASIC1.01□□□□□ -2.25
PRKNO60260 AP000753.3-201ENST00000604083 169 ntBASIC1.01□□□□□ -2.25
PRKNO60260 SNORD114-21-201ENST00000606412 72 ntBASIC1.01□□□□□ -2.25
PRKNO60260 RMST_2.1-201ENST00000617263 136 ntBASIC1.01□□□□□ -2.25
PRKNO60260 SNORA22.1-201ENST00000362701 134 ntBASIC1□□□□□ -2.25
PRKNO60260 Y_RNA.298-201ENST00000364960 107 ntBASIC1□□□□□ -2.25
PRKNO60260 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1□□□□□ -2.25
PRKNO60260 MIR1263-201ENST00000408324 86 ntBASIC1□□□□□ -2.25
PRKNO60260 RNU6-613P-201ENST00000410412 108 ntBASIC1□□□□□ -2.25
PRKNO60260 POLR2J4-204ENST00000418424 324 ntBASIC1□□□□□ -2.25
PRKNO60260 MRPL35P3-201ENST00000421557 364 ntBASIC1□□□□□ -2.25
PRKNO60260 AC244023.1-201ENST00000426884 112 ntBASIC1□□□□□ -2.25
PRKNO60260 RNU7-164P-201ENST00000459221 62 ntBASIC1□□□□□ -2.25
PRKNO60260 RNU7-123P-201ENST00000515911 60 ntBASIC1□□□□□ -2.25
PRKNO60260 SNORD33.1-201ENST00000516213 88 ntBASIC1□□□□□ -2.25
PRKNO60260 AC242498.1-201ENST00000604134 111 ntBASIC1□□□□□ -2.25
PRKNO60260 AC025166.1-201ENST00000612411 163 ntBASIC1□□□□□ -2.25
PRKNO60260 Y_RNA.353-201ENST00000365440 108 ntBASIC0.99□□□□□ -2.25
PRKNO60260 Y_RNA.430-201ENST00000384081 110 ntBASIC0.99□□□□□ -2.25
PRKNO60260 SNORA2B-201ENST00000384583 137 ntBASIC0.99□□□□□ -2.25
PRKNO60260 SNORD12C-201ENST00000386307 89 ntBASIC0.99□□□□□ -2.25
PRKNO60260 MIR1285-1-201ENST00000408593 84 ntBASIC0.99□□□□□ -2.25
PRKNO60260 RNU7-90P-201ENST00000459216 62 ntBASIC0.99□□□□□ -2.25
PRKNO60260 RPS23P4-201ENST00000487908 423 ntBASIC0.99□□□□□ -2.25
PRKNO60260 MIR4264-201ENST00000583520 66 ntBASIC0.99□□□□□ -2.25
PRKNO60260 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.99□□□□□ -2.25
PRKNO60260 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.99□□□□□ -2.25
PRKNO60260 U6.95-201ENST00000636931 70 ntBASIC0.99□□□□□ -2.25
PRKNO60260 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.98□□□□□ -2.25
PRKNO60260 Y_RNA.171-201ENST00000363760 102 ntBASIC0.98□□□□□ -2.25
PRKNO60260 Y_RNA.354-201ENST00000365448 111 ntBASIC0.98□□□□□ -2.25
PRKNO60260 Y_RNA.528-201ENST00000384575 108 ntBASIC0.98□□□□□ -2.25
PRKNO60260 MT-TN-201ENST00000387400 73 ntBASIC0.98□□□□□ -2.25
PRKNO60260 SNORD12-201ENST00000391002 90 ntBASIC0.98□□□□□ -2.25
PRKNO60260 RNU6-735P-201ENST00000410612 107 ntBASIC0.98□□□□□ -2.25
PRKNO60260 RNA5SP136-201ENST00000410906 107 ntBASIC0.98□□□□□ -2.25
PRKNO60260 AL022718.1-201ENST00000412004 84 ntBASIC0.98□□□□□ -2.25
PRKNO60260 AC063976.4-201ENST00000421971 163 ntBASIC0.98□□□□□ -2.25
PRKNO60260 AC087343.1-201ENST00000477341 475 ntBASIC0.98□□□□□ -2.25
PRKNO60260 COX6CP6-201ENST00000490840 228 ntBASIC0.98□□□□□ -2.25
PRKNO60260 RNU6-1258P-201ENST00000516911 111 ntBASIC0.98□□□□□ -2.25
PRKNO60260 AC022523.2-201ENST00000561045 150 ntBASIC0.98□□□□□ -2.25
PRKNO60260 AL359881.1-201ENST00000602916 267 ntBASIC0.98□□□□□ -2.25
PRKNO60260 AC027335.2-201ENST00000624030 375 ntBASIC0.98□□□□□ -2.25
PRKNO60260 MIR6767-201ENST00000637302 66 ntBASIC0.98□□□□□ -2.25
PRKNO60260 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
PRKNO60260 MTND5P18-201ENST00000445624 1801 ntBASIC0.98□□□□□ -2.25
PRKNO60260 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
PRKNO60260 RNU6-1290P-201ENST00000362957 109 ntBASIC0.97□□□□□ -2.25
PRKNO60260 Y_RNA.346-201ENST00000365385 112 ntBASIC0.97□□□□□ -2.25
PRKNO60260 RNU6-1237P-201ENST00000384777 107 ntBASIC0.97□□□□□ -2.25
PRKNO60260 AC002429.1-201ENST00000437672 148 ntBASIC0.97□□□□□ -2.25
PRKNO60260 RNU6-893P-201ENST00000458841 100 ntBASIC0.97□□□□□ -2.25
PRKNO60260 RNU7-62P-201ENST00000458856 62 ntBASIC0.97□□□□□ -2.25
PRKNO60260 RNU7-40P-201ENST00000516397 64 ntBASIC0.97□□□□□ -2.25
PRKNO60260 AC036111.3-201ENST00000526389 112 ntBASIC0.97□□□□□ -2.25
PRKNO60260 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
PRKNO60260 SNORD113.3-201ENST00000364630 78 ntBASIC0.96□□□□□ -2.26
PRKNO60260 Y_RNA.273-201ENST00000364703 102 ntBASIC0.96□□□□□ -2.26
PRKNO60260 RNU6-1104P-201ENST00000384723 104 ntBASIC0.96□□□□□ -2.26
PRKNO60260 MIR588-201ENST00000384900 83 ntBASIC0.96□□□□□ -2.26
PRKNO60260 MIR7-2-201ENST00000384970 110 ntBASIC0.96□□□□□ -2.26
PRKNO60260 MT-TI-201ENST00000387365 69 ntBASIC0.96□□□□□ -2.26
PRKNO60260 Y_RNA.629-201ENST00000411368 105 ntBASIC0.96□□□□□ -2.26
PRKNO60260 AL512326.2-201ENST00000426359 151 ntBASIC0.96□□□□□ -2.26
PRKNO60260 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.96□□□□□ -2.26
PRKNO60260 RNU7-113P-201ENST00000459273 62 ntBASIC0.96□□□□□ -2.26
PRKNO60260 OR2A41P-201ENST00000473586 105 ntBASIC0.96□□□□□ -2.26
PRKNO60260 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.96□□□□□ -2.26
PRKNO60260 RNA5SP404-201ENST00000517118 132 ntBASIC0.96□□□□□ -2.26
PRKNO60260 AC004812.1-201ENST00000540773 146 ntBASIC0.96□□□□□ -2.26
PRKNO60260 RNU6-94P-201ENST00000607728 107 ntBASIC0.96□□□□□ -2.26
PRKNO60260 MIR6740-201ENST00000618268 113 ntBASIC0.96□□□□□ -2.26
PRKNO60260 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
PRKNO60260 MIR377-201ENST00000362145 69 ntBASIC0.95□□□□□ -2.26
PRKNO60260 RNU6-834P-201ENST00000362367 110 ntBASIC0.95□□□□□ -2.26
PRKNO60260 Y_RNA.198-201ENST00000364013 98 ntBASIC0.95□□□□□ -2.26
PRKNO60260 Y_RNA.213-201ENST00000364178 111 ntBASIC0.95□□□□□ -2.26
PRKNO60260 Y_RNA.470-201ENST00000384307 117 ntBASIC0.95□□□□□ -2.26
PRKNO60260 Y_RNA.531-201ENST00000384589 121 ntBASIC0.95□□□□□ -2.26
PRKNO60260 RNU6-476P-201ENST00000384726 107 ntBASIC0.95□□□□□ -2.26
PRKNO60260 AC113410.1-201ENST00000505029 247 ntBASIC0.95□□□□□ -2.26
PRKNO60260 AL670379.3-201ENST00000605040 251 ntBASIC0.95□□□□□ -2.26
PRKNO60260 AC106800.4-201ENST00000614905 153 ntBASIC0.95□□□□□ -2.26
PRKNO60260 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.95□□□□□ -2.26
PRKNO60260 SNORD115-2-201ENST00000362842 82 ntBASIC0.94□□□□□ -2.26
PRKNO60260 Y_RNA.168-201ENST00000363740 102 ntBASIC0.94□□□□□ -2.26
PRKNO60260 RNU1-124P-201ENST00000363861 145 ntBASIC0.94□□□□□ -2.26
PRKNO60260 SNORD115-20-201ENST00000365099 82 ntBASIC0.94□□□□□ -2.26
PRKNO60260 RNU6-1144P-201ENST00000384247 104 ntBASIC0.94□□□□□ -2.26
PRKNO60260 MIR548A3-201ENST00000385297 97 ntBASIC0.94□□□□□ -2.26
PRKNO60260 RNU6-1064P-201ENST00000410626 104 ntBASIC0.94□□□□□ -2.26
PRKNO60260 Y_RNA.649-201ENST00000459077 103 ntBASIC0.94□□□□□ -2.26
PRKNO60260 snoU13.2-201ENST00000459201 104 ntBASIC0.94□□□□□ -2.26
PRKNO60260 snoU13.21-201ENST00000459368 105 ntBASIC0.94□□□□□ -2.26
PRKNO60260 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.94□□□□□ -2.26
PRKNO60260 MTND5P34-201ENST00000568888 325 ntBASIC0.94□□□□□ -2.26
PRKNO60260 uc_338.6-201ENST00000613544 171 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 291.1 ms