Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 AC087499.7-201ENST00000441958 109 ntBASIC0.4□□□□□ -2.35
TRAF3IP2O43734 AC107027.2-201ENST00000512197 115 ntBASIC0.4□□□□□ -2.35
TRAF3IP2O43734 RN7SKP12-201ENST00000516275 143 ntBASIC0.4□□□□□ -2.35
TRAF3IP2O43734 RNU4-54P-201ENST00000516428 129 ntBASIC0.4□□□□□ -2.35
TRAF3IP2O43734 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.4□□□□□ -2.35
TRAF3IP2O43734 MIR3612-201ENST00000579753 87 ntBASIC0.4□□□□□ -2.35
TRAF3IP2O43734 U6.90-201ENST00000614007 104 ntBASIC0.4□□□□□ -2.35
TRAF3IP2O43734 U6.70-201ENST00000620287 104 ntBASIC0.4□□□□□ -2.35
TRAF3IP2O43734 MIR5087-201ENST00000635826 76 ntBASIC0.4□□□□□ -2.35
TRAF3IP2O43734 MIR18A-201ENST00000362310 71 ntBASIC0.39□□□□□ -2.35
TRAF3IP2O43734 RNU6-364P-201ENST00000384387 107 ntBASIC0.39□□□□□ -2.35
TRAF3IP2O43734 MT-TG-201ENST00000387429 68 ntBASIC0.39□□□□□ -2.35
TRAF3IP2O43734 AC114737.2-201ENST00000421583 173 ntBASIC0.39□□□□□ -2.35
TRAF3IP2O43734 MIR330-201ENST00000362196 94 ntBASIC0.38□□□□□ -2.35
TRAF3IP2O43734 Y_RNA.233-201ENST00000364407 101 ntBASIC0.38□□□□□ -2.35
TRAF3IP2O43734 Y_RNA.258-201ENST00000364613 105 ntBASIC0.38□□□□□ -2.35
TRAF3IP2O43734 RNU6-945P-201ENST00000383947 107 ntBASIC0.38□□□□□ -2.35
TRAF3IP2O43734 RNY1P6-201ENST00000384193 109 ntBASIC0.38□□□□□ -2.35
TRAF3IP2O43734 RNU6-574P-201ENST00000384265 107 ntBASIC0.38□□□□□ -2.35
TRAF3IP2O43734 Y_RNA.521-201ENST00000384560 114 ntBASIC0.38□□□□□ -2.35
TRAF3IP2O43734 RNU7-102P-201ENST00000458948 62 ntBASIC0.38□□□□□ -2.35
TRAF3IP2O43734 RNA5SP330-201ENST00000517096 96 ntBASIC0.38□□□□□ -2.35
TRAF3IP2O43734 RNU7-156P-201ENST00000517214 74 ntBASIC0.38□□□□□ -2.35
TRAF3IP2O43734 AP003327.1-201ENST00000529684 127 ntBASIC0.38□□□□□ -2.35
TRAF3IP2O43734 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.38□□□□□ -2.35
TRAF3IP2O43734 AC243829.6-201ENST00000612652 106 ntBASIC0.38□□□□□ -2.35
TRAF3IP2O43734 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.37□□□□□ -2.35
TRAF3IP2O43734 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.37□□□□□ -2.35
TRAF3IP2O43734 MTND5P32-201ENST00000560711 1802 ntBASIC0.37□□□□□ -2.35
TRAF3IP2O43734 Y_RNA.52-201ENST00000362760 96 ntBASIC0.37□□□□□ -2.35
TRAF3IP2O43734 Y_RNA.115-201ENST00000363272 98 ntBASIC0.37□□□□□ -2.35
TRAF3IP2O43734 Y_RNA.337-201ENST00000365312 102 ntBASIC0.37□□□□□ -2.35
TRAF3IP2O43734 VTRNA1-3-201ENST00000365645 89 ntBASIC0.37□□□□□ -2.35
TRAF3IP2O43734 Y_RNA.401-201ENST00000383965 117 ntBASIC0.37□□□□□ -2.35
TRAF3IP2O43734 SNORA36.2-201ENST00000384004 127 ntBASIC0.37□□□□□ -2.35
TRAF3IP2O43734 RNU6-1237P-201ENST00000384777 107 ntBASIC0.37□□□□□ -2.35
TRAF3IP2O43734 SNORA75.5-201ENST00000391291 81 ntBASIC0.37□□□□□ -2.35
TRAF3IP2O43734 RNU6-1086P-201ENST00000410930 100 ntBASIC0.37□□□□□ -2.35
TRAF3IP2O43734 RNU5E-9P-201ENST00000411164 104 ntBASIC0.37□□□□□ -2.35
TRAF3IP2O43734 AC002350.1-201ENST00000490759 375 ntBASIC0.37□□□□□ -2.35
TRAF3IP2O43734 RNA5SP236-201ENST00000516169 116 ntBASIC0.37□□□□□ -2.35
TRAF3IP2O43734 AC141846.1-201ENST00000568348 142 ntBASIC0.37□□□□□ -2.35
TRAF3IP2O43734 AC130289.1-201ENST00000577321 73 ntBASIC0.37□□□□□ -2.35
TRAF3IP2O43734 MIR3646-201ENST00000578301 84 ntBASIC0.37□□□□□ -2.35
TRAF3IP2O43734 AC008608.1-201ENST00000603910 127 ntBASIC0.37□□□□□ -2.35
TRAF3IP2O43734 AC072026.1-201ENST00000605023 201 ntBASIC0.37□□□□□ -2.35
TRAF3IP2O43734 AC011603.4-201ENST00000611325 277 ntBASIC0.37□□□□□ -2.35
TRAF3IP2O43734 MIR8087-201ENST00000612745 78 ntBASIC0.37□□□□□ -2.35
TRAF3IP2O43734 AC141273.2-201ENST00000618989 130 ntBASIC0.37□□□□□ -2.35
TRAF3IP2O43734 Y_RNA.42-201ENST00000362660 108 ntBASIC0.36□□□□□ -2.35
TRAF3IP2O43734 RNU6-47P-201ENST00000383866 107 ntBASIC0.36□□□□□ -2.35
TRAF3IP2O43734 RNU6-949P-201ENST00000384040 107 ntBASIC0.36□□□□□ -2.35
TRAF3IP2O43734 RNU6-768P-201ENST00000384683 107 ntBASIC0.36□□□□□ -2.35
TRAF3IP2O43734 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.36□□□□□ -2.35
TRAF3IP2O43734 RPL39P25-201ENST00000449384 154 ntBASIC0.36□□□□□ -2.35
TRAF3IP2O43734 RNU6-765P-201ENST00000516916 99 ntBASIC0.36□□□□□ -2.35
TRAF3IP2O43734 RNU6-448P-201ENST00000517052 107 ntBASIC0.36□□□□□ -2.35
TRAF3IP2O43734 MIR8066-201ENST00000617280 78 ntBASIC0.36□□□□□ -2.35
TRAF3IP2O43734 RNU6-349P-201ENST00000362402 107 ntBASIC0.35□□□□□ -2.35
TRAF3IP2O43734 Y_RNA.188-201ENST00000363952 111 ntBASIC0.35□□□□□ -2.35
TRAF3IP2O43734 Y_RNA.274-201ENST00000364714 101 ntBASIC0.35□□□□□ -2.35
TRAF3IP2O43734 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.35□□□□□ -2.35
TRAF3IP2O43734 SNORD93-201ENST00000408813 74 ntBASIC0.35□□□□□ -2.35
TRAF3IP2O43734 RNA5SP144-201ENST00000410846 116 ntBASIC0.35□□□□□ -2.35
TRAF3IP2O43734 RNU4-83P-201ENST00000410863 133 ntBASIC0.35□□□□□ -2.35
TRAF3IP2O43734 MTATP6P21-201ENST00000440681 189 ntBASIC0.35□□□□□ -2.35
TRAF3IP2O43734 RNU6-1219P-201ENST00000516143 112 ntBASIC0.35□□□□□ -2.35
TRAF3IP2O43734 Y_RNA.700-201ENST00000516806 100 ntBASIC0.35□□□□□ -2.35
TRAF3IP2O43734 Y_RNA.757-201ENST00000578934 114 ntBASIC0.35□□□□□ -2.35
TRAF3IP2O43734 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.35□□□□□ -2.35
TRAF3IP2O43734 SNORD115-2-201ENST00000362842 82 ntBASIC0.34□□□□□ -2.36
TRAF3IP2O43734 RNU4-16P-201ENST00000364737 141 ntBASIC0.34□□□□□ -2.36
TRAF3IP2O43734 RNU6-818P-201ENST00000364837 108 ntBASIC0.34□□□□□ -2.36
TRAF3IP2O43734 SNORD115-20-201ENST00000365099 82 ntBASIC0.34□□□□□ -2.36
TRAF3IP2O43734 Y_RNA.374-201ENST00000365606 101 ntBASIC0.34□□□□□ -2.36
TRAF3IP2O43734 SNORA50A-201ENST00000384225 134 ntBASIC0.34□□□□□ -2.36
TRAF3IP2O43734 U8.15-201ENST00000390947 134 ntBASIC0.34□□□□□ -2.36
TRAF3IP2O43734 RNU6-239P-201ENST00000390990 99 ntBASIC0.34□□□□□ -2.36
TRAF3IP2O43734 Y_RNA.644-201ENST00000459006 113 ntBASIC0.34□□□□□ -2.36
TRAF3IP2O43734 Y_RNA.674-201ENST00000516362 113 ntBASIC0.34□□□□□ -2.36
TRAF3IP2O43734 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.34□□□□□ -2.36
TRAF3IP2O43734 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
TRAF3IP2O43734 RNU4-84P-201ENST00000364200 139 ntBASIC0.33□□□□□ -2.36
TRAF3IP2O43734 Y_RNA.297-201ENST00000364950 91 ntBASIC0.33□□□□□ -2.36
TRAF3IP2O43734 RNU6-1318P-201ENST00000365389 103 ntBASIC0.33□□□□□ -2.36
TRAF3IP2O43734 RNY1P8-201ENST00000383970 114 ntBASIC0.33□□□□□ -2.36
TRAF3IP2O43734 SNORA18-201ENST00000384416 132 ntBASIC0.33□□□□□ -2.36
TRAF3IP2O43734 Y_RNA.552-201ENST00000384665 112 ntBASIC0.33□□□□□ -2.36
TRAF3IP2O43734 Y_RNA.588-201ENST00000391254 102 ntBASIC0.33□□□□□ -2.36
TRAF3IP2O43734 AL022718.1-201ENST00000412004 84 ntBASIC0.33□□□□□ -2.36
TRAF3IP2O43734 RNU6-1271P-201ENST00000517049 105 ntBASIC0.33□□□□□ -2.36
TRAF3IP2O43734 MIR6082-201ENST00000613604 109 ntBASIC0.33□□□□□ -2.36
TRAF3IP2O43734 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.33□□□□□ -2.36
TRAF3IP2O43734 AL109933.3-201ENST00000619095 188 ntBASIC0.33□□□□□ -2.36
TRAF3IP2O43734 uc_338.16-201ENST00000621804 95 ntBASIC0.33□□□□□ -2.36
TRAF3IP2O43734 Y_RNA.30-201ENST00000362572 97 ntBASIC0.32□□□□□ -2.36
TRAF3IP2O43734 RNU6-379P-201ENST00000363813 104 ntBASIC0.32□□□□□ -2.36
TRAF3IP2O43734 Y_RNA.240-201ENST00000364469 95 ntBASIC0.32□□□□□ -2.36
TRAF3IP2O43734 RNU6-1082P-201ENST00000364574 107 ntBASIC0.32□□□□□ -2.36
TRAF3IP2O43734 RNU6-200P-201ENST00000364743 107 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms