Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 Y_RNA.470-201ENST00000384307 117 ntBASIC1.68□□□□□ -2.14
TRIM38O00635 SNORD38C-201ENST00000384381 69 ntBASIC1.68□□□□□ -2.14
TRIM38O00635 MIR653-201ENST00000385279 96 ntBASIC1.68□□□□□ -2.14
TRIM38O00635 AL451046.2-201ENST00000403074 277 ntBASIC1.68□□□□□ -2.14
TRIM38O00635 AL022718.1-201ENST00000412004 84 ntBASIC1.68□□□□□ -2.14
TRIM38O00635 RNU2-11P-201ENST00000459191 187 ntBASIC1.68□□□□□ -2.14
TRIM38O00635 RNU7-96P-201ENST00000459535 64 ntBASIC1.68□□□□□ -2.14
TRIM38O00635 MIR3937-201ENST00000580135 106 ntBASIC1.68□□□□□ -2.14
TRIM38O00635 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.67□□□□□ -2.14
TRIM38O00635 Y_RNA.10-201ENST00000362371 110 ntBASIC1.67□□□□□ -2.14
TRIM38O00635 SNORD115-34-201ENST00000362441 82 ntBASIC1.67□□□□□ -2.14
TRIM38O00635 SNORD115-12-201ENST00000362583 82 ntBASIC1.67□□□□□ -2.14
TRIM38O00635 SNORD115-29-201ENST00000362834 82 ntBASIC1.67□□□□□ -2.14
TRIM38O00635 SNORD115-9-201ENST00000362912 82 ntBASIC1.67□□□□□ -2.14
TRIM38O00635 SNORD115-21-201ENST00000362963 81 ntBASIC1.67□□□□□ -2.14
TRIM38O00635 SNORD115-14-201ENST00000363090 81 ntBASIC1.67□□□□□ -2.14
TRIM38O00635 SNORD115-13-201ENST00000363358 82 ntBASIC1.67□□□□□ -2.14
TRIM38O00635 SNORD115-41-201ENST00000363608 82 ntBASIC1.67□□□□□ -2.14
TRIM38O00635 SNORD115-11-201ENST00000363616 82 ntBASIC1.67□□□□□ -2.14
TRIM38O00635 SNORD115-5-201ENST00000363633 82 ntBASIC1.67□□□□□ -2.14
TRIM38O00635 SNORD115-39-201ENST00000363694 82 ntBASIC1.67□□□□□ -2.14
TRIM38O00635 SNORD115-4-201ENST00000363810 82 ntBASIC1.67□□□□□ -2.14
TRIM38O00635 SNORD115-16-201ENST00000363887 82 ntBASIC1.67□□□□□ -2.14
TRIM38O00635 SNORD115-6-201ENST00000363942 82 ntBASIC1.67□□□□□ -2.14
TRIM38O00635 Y_RNA.190-201ENST00000363964 101 ntBASIC1.67□□□□□ -2.14
TRIM38O00635 SNORD115-42-201ENST00000364273 82 ntBASIC1.67□□□□□ -2.14
TRIM38O00635 RNU6-60P-201ENST00000364792 103 ntBASIC1.67□□□□□ -2.14
TRIM38O00635 SNORD115-15-201ENST00000364809 81 ntBASIC1.67□□□□□ -2.14
TRIM38O00635 SNORD115-1-201ENST00000364961 82 ntBASIC1.67□□□□□ -2.14
TRIM38O00635 SNORD115-26-201ENST00000365067 82 ntBASIC1.67□□□□□ -2.14
TRIM38O00635 SNORD115-10-201ENST00000365073 81 ntBASIC1.67□□□□□ -2.14
TRIM38O00635 SNORD115-43-201ENST00000365503 82 ntBASIC1.67□□□□□ -2.14
TRIM38O00635 SNORD115-36-201ENST00000365629 82 ntBASIC1.67□□□□□ -2.14
TRIM38O00635 RNU6-675P-201ENST00000384236 104 ntBASIC1.67□□□□□ -2.14
TRIM38O00635 RNU6-616P-201ENST00000384353 107 ntBASIC1.67□□□□□ -2.14
TRIM38O00635 MIR452-201ENST00000385020 85 ntBASIC1.67□□□□□ -2.14
TRIM38O00635 SNORA7.5-201ENST00000410672 110 ntBASIC1.67□□□□□ -2.14
TRIM38O00635 AC015922.2-201ENST00000435593 184 ntBASIC1.67□□□□□ -2.14
TRIM38O00635 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.67□□□□□ -2.14
TRIM38O00635 RPL39P39-201ENST00000455840 151 ntBASIC1.67□□□□□ -2.14
TRIM38O00635 RPL30P7-201ENST00000479312 323 ntBASIC1.67□□□□□ -2.14
TRIM38O00635 RNU6-267P-201ENST00000516714 103 ntBASIC1.67□□□□□ -2.14
TRIM38O00635 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.67□□□□□ -2.14
TRIM38O00635 RNU6-1276P-201ENST00000365372 104 ntBASIC1.66□□□□□ -2.14
TRIM38O00635 Y_RNA.467-201ENST00000384297 102 ntBASIC1.66□□□□□ -2.14
TRIM38O00635 RNU6-813P-201ENST00000384691 107 ntBASIC1.66□□□□□ -2.14
TRIM38O00635 RNU4-69P-201ENST00000410677 143 ntBASIC1.66□□□□□ -2.14
TRIM38O00635 RNU6-402P-201ENST00000410678 103 ntBASIC1.66□□□□□ -2.14
TRIM38O00635 RNU6-1190P-201ENST00000410811 104 ntBASIC1.66□□□□□ -2.14
TRIM38O00635 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.66□□□□□ -2.14
TRIM38O00635 RNU6-322P-201ENST00000516010 103 ntBASIC1.66□□□□□ -2.14
TRIM38O00635 AC019176.1-201ENST00000518519 225 ntBASIC1.66□□□□□ -2.14
TRIM38O00635 MIR548AE2-201ENST00000583456 67 ntBASIC1.66□□□□□ -2.14
TRIM38O00635 MIR6841-201ENST00000637129 72 ntBASIC1.66□□□□□ -2.14
TRIM38O00635 RNU6-1125P-201ENST00000363601 107 ntBASIC1.65□□□□□ -2.15
TRIM38O00635 RNU6-219P-201ENST00000364728 107 ntBASIC1.65□□□□□ -2.15
TRIM38O00635 SNORD115-35-201ENST00000365122 82 ntBASIC1.65□□□□□ -2.15
TRIM38O00635 RNU6-979P-201ENST00000383896 107 ntBASIC1.65□□□□□ -2.15
TRIM38O00635 RNU6-1201P-201ENST00000384227 107 ntBASIC1.65□□□□□ -2.15
TRIM38O00635 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.65□□□□□ -2.15
TRIM38O00635 SNORA26.6-201ENST00000391256 115 ntBASIC1.65□□□□□ -2.15
TRIM38O00635 RPS27P16-201ENST00000425758 201 ntBASIC1.65□□□□□ -2.15
TRIM38O00635 RNU7-113P-201ENST00000459273 62 ntBASIC1.65□□□□□ -2.15
TRIM38O00635 AL359821.1-201ENST00000605519 182 ntBASIC1.65□□□□□ -2.15
TRIM38O00635 IGLL4P-201ENST00000614590 133 ntBASIC1.65□□□□□ -2.15
TRIM38O00635 MIR3202-2-201ENST00000635980 79 ntBASIC1.65□□□□□ -2.15
TRIM38O00635 SNORD115-2-201ENST00000362842 82 ntBASIC1.64□□□□□ -2.15
TRIM38O00635 Y_RNA.95-201ENST00000363079 95 ntBASIC1.64□□□□□ -2.15
TRIM38O00635 SNORD115-20-201ENST00000365099 82 ntBASIC1.64□□□□□ -2.15
TRIM38O00635 Y_RNA.377-201ENST00000365644 108 ntBASIC1.64□□□□□ -2.15
TRIM38O00635 RNU6-1319P-201ENST00000390855 104 ntBASIC1.64□□□□□ -2.15
TRIM38O00635 RNU6-747P-201ENST00000390928 104 ntBASIC1.64□□□□□ -2.15
TRIM38O00635 RNU6-241P-201ENST00000391148 104 ntBASIC1.64□□□□□ -2.15
TRIM38O00635 RNU6-177P-201ENST00000411257 104 ntBASIC1.64□□□□□ -2.15
TRIM38O00635 MRPL35P3-201ENST00000421557 364 ntBASIC1.64□□□□□ -2.15
TRIM38O00635 RNU6-521P-201ENST00000516663 105 ntBASIC1.64□□□□□ -2.15
TRIM38O00635 DNAJC19P9-201ENST00000555084 351 ntBASIC1.64□□□□□ -2.15
TRIM38O00635 MIR5588-201ENST00000581890 63 ntBASIC1.64□□□□□ -2.15
TRIM38O00635 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
TRIM38O00635 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
TRIM38O00635 SNORA22.1-201ENST00000362701 134 ntBASIC1.63□□□□□ -2.15
TRIM38O00635 Y_RNA.221-201ENST00000364248 96 ntBASIC1.63□□□□□ -2.15
TRIM38O00635 SNORD45B-201ENST00000364617 72 ntBASIC1.63□□□□□ -2.15
TRIM38O00635 Y_RNA.299-201ENST00000364973 94 ntBASIC1.63□□□□□ -2.15
TRIM38O00635 SNORA18-201ENST00000384416 132 ntBASIC1.63□□□□□ -2.15
TRIM38O00635 MIR516B2-201ENST00000385190 85 ntBASIC1.63□□□□□ -2.15
TRIM38O00635 MIR1287-201ENST00000408492 90 ntBASIC1.63□□□□□ -2.15
TRIM38O00635 RNU7-95P-201ENST00000459222 64 ntBASIC1.63□□□□□ -2.15
TRIM38O00635 TRMT112P2-201ENST00000512910 132 ntBASIC1.63□□□□□ -2.15
TRIM38O00635 Y_RNA.659-201ENST00000515994 113 ntBASIC1.63□□□□□ -2.15
TRIM38O00635 RNA5SP33-201ENST00000516687 98 ntBASIC1.63□□□□□ -2.15
TRIM38O00635 Y_RNA.244-201ENST00000364484 109 ntBASIC1.62□□□□□ -2.15
TRIM38O00635 Y_RNA.247-201ENST00000364500 92 ntBASIC1.62□□□□□ -2.15
TRIM38O00635 Y_RNA.313-201ENST00000365095 103 ntBASIC1.62□□□□□ -2.15
TRIM38O00635 RNU6-997P-201ENST00000384725 107 ntBASIC1.62□□□□□ -2.15
TRIM38O00635 RNU6-913P-201ENST00000390913 95 ntBASIC1.62□□□□□ -2.15
TRIM38O00635 RNU6-887P-201ENST00000410660 100 ntBASIC1.62□□□□□ -2.15
TRIM38O00635 RNU6-917P-201ENST00000516294 104 ntBASIC1.62□□□□□ -2.15
TRIM38O00635 AL357312.1-201ENST00000603879 298 ntBASIC1.62□□□□□ -2.15
TRIM38O00635 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 188.3 ms