Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 MIR4493-201ENST00000584016 73 ntBASIC-0.8□□□□□ -2.54
SDCBPO00560 AC006504.6-201ENST00000590142 199 ntBASIC-0.8□□□□□ -2.54
SDCBPO00560 AC098479.1-201ENST00000609225 154 ntBASIC-0.8□□□□□ -2.54
SDCBPO00560 AC133104.2-201ENST00000615272 193 ntBASIC-0.8□□□□□ -2.54
SDCBPO00560 AL606534.2-204ENST00000635008 178 ntBASIC-0.8□□□□□ -2.54
SDCBPO00560 SNORD114-14-201ENST00000362723 75 ntBASIC-0.81□□□□□ -2.54
SDCBPO00560 Y_RNA.279-201ENST00000364763 95 ntBASIC-0.81□□□□□ -2.54
SDCBPO00560 RNU6-429P-201ENST00000384582 108 ntBASIC-0.81□□□□□ -2.54
SDCBPO00560 RNU6-455P-201ENST00000384681 107 ntBASIC-0.81□□□□□ -2.54
SDCBPO00560 MIR635-201ENST00000384830 98 ntBASIC-0.81□□□□□ -2.54
SDCBPO00560 AL603914.1-201ENST00000401964 204 ntBASIC-0.81□□□□□ -2.54
SDCBPO00560 AL022718.1-201ENST00000412004 84 ntBASIC-0.81□□□□□ -2.54
SDCBPO00560 AC097635.1-201ENST00000450678 155 ntBASIC-0.81□□□□□ -2.54
SDCBPO00560 SNORA20.3-201ENST00000516880 132 ntBASIC-0.81□□□□□ -2.54
SDCBPO00560 AC026407.1-201ENST00000518369 204 ntBASIC-0.81□□□□□ -2.54
SDCBPO00560 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.81□□□□□ -2.54
SDCBPO00560 MIR548AE1-201ENST00000583292 70 ntBASIC-0.81□□□□□ -2.54
SDCBPO00560 AC025253.1-201ENST00000613623 543 ntBASIC-0.81□□□□□ -2.54
SDCBPO00560 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-0.81□□□□□ -2.54
SDCBPO00560 MIR376A1-201ENST00000616574 68 ntBASIC-0.81□□□□□ -2.54
SDCBPO00560 Y_RNA.39-201ENST00000362620 98 ntBASIC-0.82□□□□□ -2.54
SDCBPO00560 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.82□□□□□ -2.54
SDCBPO00560 MIR539-201ENST00000365690 78 ntBASIC-0.82□□□□□ -2.54
SDCBPO00560 Y_RNA.394-201ENST00000383942 103 ntBASIC-0.82□□□□□ -2.54
SDCBPO00560 MIR9-2-201ENST00000384838 87 ntBASIC-0.82□□□□□ -2.54
SDCBPO00560 RNY4P36-201ENST00000391116 96 ntBASIC-0.82□□□□□ -2.54
SDCBPO00560 RNA5SP144-201ENST00000410846 116 ntBASIC-0.82□□□□□ -2.54
SDCBPO00560 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-0.82□□□□□ -2.54
SDCBPO00560 RNU6-453P-201ENST00000516819 85 ntBASIC-0.82□□□□□ -2.54
SDCBPO00560 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-0.82□□□□□ -2.54
SDCBPO00560 AC040926.1-201ENST00000530195 238 ntBASIC-0.82□□□□□ -2.54
SDCBPO00560 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.82□□□□□ -2.54
SDCBPO00560 MIR548AG2-201ENST00000581228 64 ntBASIC-0.82□□□□□ -2.54
SDCBPO00560 AL365205.2-201ENST00000594586 68 ntBASIC-0.82□□□□□ -2.54
SDCBPO00560 AC113139.1-201ENST00000605049 239 ntBASIC-0.82□□□□□ -2.54
SDCBPO00560 RNU4-90P-201ENST00000362773 141 ntBASIC-0.83□□□□□ -2.54
SDCBPO00560 Y_RNA.105-201ENST00000363182 111 ntBASIC-0.83□□□□□ -2.54
SDCBPO00560 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.83□□□□□ -2.54
SDCBPO00560 RNU4-70P-201ENST00000384579 139 ntBASIC-0.83□□□□□ -2.54
SDCBPO00560 SNORD115-46-201ENST00000390982 71 ntBASIC-0.83□□□□□ -2.54
SDCBPO00560 SNORD75.1-201ENST00000408373 60 ntBASIC-0.83□□□□□ -2.54
SDCBPO00560 AL589823.1-201ENST00000429577 183 ntBASIC-0.83□□□□□ -2.54
SDCBPO00560 AC093423.1-201ENST00000440817 142 ntBASIC-0.83□□□□□ -2.54
SDCBPO00560 AL731563.1-201ENST00000442202 214 ntBASIC-0.83□□□□□ -2.54
SDCBPO00560 MTND4P19-201ENST00000446659 478 ntBASIC-0.83□□□□□ -2.54
SDCBPO00560 AC082651.2-201ENST00000496833 166 ntBASIC-0.83□□□□□ -2.54
SDCBPO00560 MTND5P40-201ENST00000559945 246 ntBASIC-0.83□□□□□ -2.54
SDCBPO00560 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-0.83□□□□□ -2.54
SDCBPO00560 snoU2_19.4-201ENST00000364329 80 ntBASIC-0.84□□□□□ -2.54
SDCBPO00560 Y_RNA.259-201ENST00000364619 101 ntBASIC-0.84□□□□□ -2.54
SDCBPO00560 Y_RNA.541-201ENST00000384640 113 ntBASIC-0.84□□□□□ -2.54
SDCBPO00560 AL606845.1-201ENST00000404881 255 ntBASIC-0.84□□□□□ -2.54
SDCBPO00560 RNU6-893P-201ENST00000458841 100 ntBASIC-0.84□□□□□ -2.54
SDCBPO00560 RNU7-113P-201ENST00000459273 62 ntBASIC-0.84□□□□□ -2.54
SDCBPO00560 MIR1270-201ENST00000459320 83 ntBASIC-0.84□□□□□ -2.54
SDCBPO00560 RNU6-561P-201ENST00000516222 102 ntBASIC-0.84□□□□□ -2.54
SDCBPO00560 RNU7-13P-201ENST00000516413 62 ntBASIC-0.84□□□□□ -2.54
SDCBPO00560 RNA5SP33-201ENST00000516687 98 ntBASIC-0.84□□□□□ -2.54
SDCBPO00560 RNU7-70P-201ENST00000516941 66 ntBASIC-0.84□□□□□ -2.54
SDCBPO00560 Y_RNA.718-201ENST00000517110 102 ntBASIC-0.84□□□□□ -2.54
SDCBPO00560 YWHAEP2-201ENST00000580066 112 ntBASIC-0.84□□□□□ -2.54
SDCBPO00560 MIR4636-201ENST00000582271 80 ntBASIC-0.84□□□□□ -2.54
SDCBPO00560 RNU7-10P-201ENST00000607194 63 ntBASIC-0.84□□□□□ -2.54
SDCBPO00560 AC092794.1-201ENST00000612734 582 ntBASIC-0.84□□□□□ -2.54
SDCBPO00560 uc_338.10-201ENST00000621872 182 ntBASIC-0.84□□□□□ -2.54
SDCBPO00560 SNORD114-10-201ENST00000363409 72 ntBASIC-0.85□□□□□ -2.55
SDCBPO00560 RNU6-47P-201ENST00000383866 107 ntBASIC-0.85□□□□□ -2.55
SDCBPO00560 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.85□□□□□ -2.55
SDCBPO00560 MIR519E-201ENST00000385075 84 ntBASIC-0.85□□□□□ -2.55
SDCBPO00560 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-0.85□□□□□ -2.55
SDCBPO00560 AC016907.1-201ENST00000419483 435 ntBASIC-0.85□□□□□ -2.55
SDCBPO00560 RNU7-195P-201ENST00000458793 62 ntBASIC-0.85□□□□□ -2.55
SDCBPO00560 MIR548AE2-201ENST00000583456 67 ntBASIC-0.85□□□□□ -2.55
SDCBPO00560 AL138825.1-201ENST00000618587 192 ntBASIC-0.85□□□□□ -2.55
SDCBPO00560 AC069503.3-201ENST00000618674 145 ntBASIC-0.85□□□□□ -2.55
SDCBPO00560 AC093726.3-201ENST00000637588 150 ntBASIC-0.85□□□□□ -2.55
SDCBPO00560 Y_RNA.5-201ENST00000362334 102 ntBASIC-0.86□□□□□ -2.55
SDCBPO00560 SNORD115-2-201ENST00000362842 82 ntBASIC-0.86□□□□□ -2.55
SDCBPO00560 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.86□□□□□ -2.55
SDCBPO00560 Y_RNA.160-201ENST00000363677 92 ntBASIC-0.86□□□□□ -2.55
SDCBPO00560 Y_RNA.199-201ENST00000364014 102 ntBASIC-0.86□□□□□ -2.55
SDCBPO00560 SNORD115-20-201ENST00000365099 82 ntBASIC-0.86□□□□□ -2.55
SDCBPO00560 RNU1-115P-201ENST00000365329 160 ntBASIC-0.86□□□□□ -2.55
SDCBPO00560 RNU6-211P-201ENST00000384047 107 ntBASIC-0.86□□□□□ -2.55
SDCBPO00560 RNY3P5-201ENST00000384127 102 ntBASIC-0.86□□□□□ -2.55
SDCBPO00560 Y_RNA.526-201ENST00000384572 110 ntBASIC-0.86□□□□□ -2.55
SDCBPO00560 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.86□□□□□ -2.55
SDCBPO00560 Y_RNA.581-201ENST00000391017 97 ntBASIC-0.86□□□□□ -2.55
SDCBPO00560 RNU6-121P-201ENST00000410525 99 ntBASIC-0.86□□□□□ -2.55
SDCBPO00560 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.86□□□□□ -2.55
SDCBPO00560 AL445193.1-201ENST00000441183 141 ntBASIC-0.86□□□□□ -2.55
SDCBPO00560 RNU6-1149P-201ENST00000516810 97 ntBASIC-0.86□□□□□ -2.55
SDCBPO00560 MIR4500-201ENST00000579472 76 ntBASIC-0.86□□□□□ -2.55
SDCBPO00560 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-0.86□□□□□ -2.55
SDCBPO00560 Y_RNA.252-201ENST00000364556 101 ntBASIC-0.87□□□□□ -2.55
SDCBPO00560 SNORD114-29-201ENST00000364819 70 ntBASIC-0.87□□□□□ -2.55
SDCBPO00560 RNU6-290P-201ENST00000365212 101 ntBASIC-0.87□□□□□ -2.55
SDCBPO00560 Y_RNA.445-201ENST00000384168 102 ntBASIC-0.87□□□□□ -2.55
SDCBPO00560 SNORD56B-201ENST00000384713 71 ntBASIC-0.87□□□□□ -2.55
SDCBPO00560 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.87□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 184.8 ms