Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 MIR938-201ENST00000401216 83 ntBASIC0.65□□□□□ -2.31
O00370 SNORD93-201ENST00000408813 74 ntBASIC0.65□□□□□ -2.31
O00370 RNU5E-9P-201ENST00000411164 104 ntBASIC0.65□□□□□ -2.31
O00370 AC244098.3-201ENST00000424803 96 ntBASIC0.65□□□□□ -2.31
O00370 MIR18B-201ENST00000454574 71 ntBASIC0.65□□□□□ -2.31
O00370 RNU5E-3P-201ENST00000515913 68 ntBASIC0.65□□□□□ -2.31
O00370 Y_RNA.662-201ENST00000516028 97 ntBASIC0.65□□□□□ -2.31
O00370 AC090425.1-201ENST00000610007 140 ntBASIC0.65□□□□□ -2.31
O00370 Y_RNA.29-201ENST00000362570 113 ntBASIC0.64□□□□□ -2.31
O00370 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
O00370 RNY1P8-201ENST00000383970 114 ntBASIC0.64□□□□□ -2.31
O00370 SNORA18-201ENST00000384416 132 ntBASIC0.64□□□□□ -2.31
O00370 SNORA81.3-201ENST00000517283 198 ntBASIC0.64□□□□□ -2.31
O00370 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.64□□□□□ -2.31
O00370 AL662814.1-201ENST00000617364 121 ntBASIC0.64□□□□□ -2.31
O00370 MIR6513-201ENST00000621188 64 ntBASIC0.64□□□□□ -2.31
O00370 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.64□□□□□ -2.31
O00370 MIR30D-201ENST00000362283 70 ntBASIC0.63□□□□□ -2.31
O00370 RNU6-403P-201ENST00000363163 104 ntBASIC0.63□□□□□ -2.31
O00370 Y_RNA.171-201ENST00000363760 102 ntBASIC0.63□□□□□ -2.31
O00370 RNA5SP499-201ENST00000363982 119 ntBASIC0.63□□□□□ -2.31
O00370 SNORA72.6-201ENST00000384520 129 ntBASIC0.63□□□□□ -2.31
O00370 MIR573-201ENST00000384964 99 ntBASIC0.63□□□□□ -2.31
O00370 MT-TF-201ENST00000387314 71 ntBASIC0.63□□□□□ -2.31
O00370 RNU6-239P-201ENST00000390990 99 ntBASIC0.63□□□□□ -2.31
O00370 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.63□□□□□ -2.31
O00370 RNU7-102P-201ENST00000458948 62 ntBASIC0.63□□□□□ -2.31
O00370 RNU7-156P-201ENST00000517214 74 ntBASIC0.63□□□□□ -2.31
O00370 AL589743.1-201ENST00000551932 2712 ntBASIC0.62□□□□□ -2.31
O00370 RNU4-84P-201ENST00000364200 139 ntBASIC0.62□□□□□ -2.31
O00370 MIR125B2-201ENST00000385128 89 ntBASIC0.62□□□□□ -2.31
O00370 MIR92A1-201ENST00000385233 78 ntBASIC0.62□□□□□ -2.31
O00370 RNU6-447P-201ENST00000410293 104 ntBASIC0.62□□□□□ -2.31
O00370 RNU6-1118P-201ENST00000410382 104 ntBASIC0.62□□□□□ -2.31
O00370 RNU6-1076P-201ENST00000410397 104 ntBASIC0.62□□□□□ -2.31
O00370 RNU6-355P-201ENST00000410427 104 ntBASIC0.62□□□□□ -2.31
O00370 RNU6-791P-201ENST00000410467 104 ntBASIC0.62□□□□□ -2.31
O00370 RNU6-705P-201ENST00000410601 104 ntBASIC0.62□□□□□ -2.31
O00370 RNU6-1100P-201ENST00000410691 104 ntBASIC0.62□□□□□ -2.31
O00370 RNU6-860P-201ENST00000410860 104 ntBASIC0.62□□□□□ -2.31
O00370 RNU4-83P-201ENST00000410863 133 ntBASIC0.62□□□□□ -2.31
O00370 RNU6-1217P-201ENST00000411276 104 ntBASIC0.62□□□□□ -2.31
O00370 RNU6-785P-201ENST00000411324 104 ntBASIC0.62□□□□□ -2.31
O00370 AC074198.2-201ENST00000508153 258 ntBASIC0.62□□□□□ -2.31
O00370 RNA5SP121-201ENST00000516537 101 ntBASIC0.62□□□□□ -2.31
O00370 AC008608.1-201ENST00000603910 127 ntBASIC0.62□□□□□ -2.31
O00370 U6.90-201ENST00000614007 104 ntBASIC0.62□□□□□ -2.31
O00370 U6.70-201ENST00000620287 104 ntBASIC0.62□□□□□ -2.31
O00370 MIR6841-201ENST00000637129 72 ntBASIC0.62□□□□□ -2.31
O00370 SNORD18B-201ENST00000365659 72 ntBASIC0.61□□□□□ -2.31
O00370 Y_RNA.430-201ENST00000384081 110 ntBASIC0.61□□□□□ -2.31
O00370 MIR563-201ENST00000385080 79 ntBASIC0.61□□□□□ -2.31
O00370 RNU7-113P-201ENST00000459273 62 ntBASIC0.61□□□□□ -2.31
O00370 RNU7-120P-201ENST00000459334 63 ntBASIC0.61□□□□□ -2.31
O00370 RNU4-54P-201ENST00000516428 129 ntBASIC0.61□□□□□ -2.31
O00370 AC141846.1-201ENST00000568348 142 ntBASIC0.61□□□□□ -2.31
O00370 RNU6-682P-201ENST00000363843 106 ntBASIC0.6□□□□□ -2.31
O00370 Y_RNA.240-201ENST00000364469 95 ntBASIC0.6□□□□□ -2.31
O00370 SNORA32-201ENST00000384072 121 ntBASIC0.6□□□□□ -2.31
O00370 Y_RNA.497-201ENST00000384447 98 ntBASIC0.6□□□□□ -2.31
O00370 MIR936-201ENST00000401264 98 ntBASIC0.6□□□□□ -2.31
O00370 RNU6-733P-201ENST00000410759 104 ntBASIC0.6□□□□□ -2.31
O00370 AL022718.1-201ENST00000412004 84 ntBASIC0.6□□□□□ -2.31
O00370 RNU6-240P-201ENST00000516098 97 ntBASIC0.6□□□□□ -2.31
O00370 Y_RNA.757-201ENST00000578934 114 ntBASIC0.6□□□□□ -2.31
O00370 MIR3612-201ENST00000579753 87 ntBASIC0.6□□□□□ -2.31
O00370 DNAJC19P2-201ENST00000593340 302 ntBASIC0.6□□□□□ -2.31
O00370 AC004792.1-201ENST00000614523 137 ntBASIC0.6□□□□□ -2.31
O00370 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.59□□□□□ -2.31
O00370 RNU4-11P-201ENST00000365287 132 ntBASIC0.59□□□□□ -2.31
O00370 Y_RNA.584-201ENST00000391090 114 ntBASIC0.59□□□□□ -2.31
O00370 RNA5SP144-201ENST00000410846 116 ntBASIC0.59□□□□□ -2.31
O00370 RNU6-1086P-201ENST00000410930 100 ntBASIC0.59□□□□□ -2.31
O00370 MTATP6P21-201ENST00000440681 189 ntBASIC0.59□□□□□ -2.31
O00370 RNU7-56P-201ENST00000458744 62 ntBASIC0.59□□□□□ -2.31
O00370 RNU6-893P-201ENST00000458841 100 ntBASIC0.59□□□□□ -2.31
O00370 RNU6-1258P-201ENST00000516911 111 ntBASIC0.59□□□□□ -2.31
O00370 Y_RNA.8-201ENST00000362353 102 ntBASIC0.58□□□□□ -2.32
O00370 RNY1P11-201ENST00000363759 113 ntBASIC0.58□□□□□ -2.32
O00370 Y_RNA.272-201ENST00000364696 102 ntBASIC0.58□□□□□ -2.32
O00370 RNA5SP236-201ENST00000516169 116 ntBASIC0.58□□□□□ -2.32
O00370 RNA5SP33-201ENST00000516687 98 ntBASIC0.58□□□□□ -2.32
O00370 AC021443.1-201ENST00000604478 211 ntBASIC0.58□□□□□ -2.32
O00370 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
O00370 RNU6-349P-201ENST00000362402 107 ntBASIC0.57□□□□□ -2.32
O00370 RNU6-508P-201ENST00000363231 103 ntBASIC0.57□□□□□ -2.32
O00370 RNU6-151P-201ENST00000364158 107 ntBASIC0.57□□□□□ -2.32
O00370 SNORD116-18-201ENST00000383961 92 ntBASIC0.57□□□□□ -2.32
O00370 Y_RNA.470-201ENST00000384307 117 ntBASIC0.57□□□□□ -2.32
O00370 U8.15-201ENST00000390947 134 ntBASIC0.57□□□□□ -2.32
O00370 RNU6-679P-201ENST00000391003 106 ntBASIC0.57□□□□□ -2.32
O00370 RNA5SP193-201ENST00000410353 107 ntBASIC0.57□□□□□ -2.32
O00370 AC098934.3-201ENST00000430450 190 ntBASIC0.57□□□□□ -2.32
O00370 AL157398.1-201ENST00000452981 186 ntBASIC0.57□□□□□ -2.32
O00370 AC112693.2-201ENST00000556538 232 ntBASIC0.57□□□□□ -2.32
O00370 AC133485.4-201ENST00000561835 220 ntBASIC0.57□□□□□ -2.32
O00370 AC138907.4-201ENST00000570107 226 ntBASIC0.57□□□□□ -2.32
O00370 MIR3646-201ENST00000578301 84 ntBASIC0.57□□□□□ -2.32
O00370 uc_338.17-201ENST00000619633 179 ntBASIC0.57□□□□□ -2.32
O00370 RNU6-945P-201ENST00000383947 107 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 179.4 ms