Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
RFXAPO00287 RNU6-1237P-201ENST00000384777 107 ntBASIC2.1□□□□□ -2.07
RFXAPO00287 MIR181B2-201ENST00000385004 89 ntBASIC2.1□□□□□ -2.07
RFXAPO00287 MIR29C-201ENST00000385231 88 ntBASIC2.1□□□□□ -2.07
RFXAPO00287 SPINT5P-201ENST00000448174 155 ntBASIC2.1□□□□□ -2.07
RFXAPO00287 RNU7-79P-201ENST00000516082 62 ntBASIC2.1□□□□□ -2.07
RFXAPO00287 MIR5089-201ENST00000580047 84 ntBASIC2.1□□□□□ -2.07
RFXAPO00287 MIR4303-201ENST00000581299 66 ntBASIC2.1□□□□□ -2.07
RFXAPO00287 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.1□□□□□ -2.07
RFXAPO00287 SNORD3E-202ENST00000627253 216 ntBASIC2.1□□□□□ -2.07
RFXAPO00287 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.1□□□□□ -2.07
RFXAPO00287 MIR4662A-201ENST00000637499 67 ntBASIC2.1□□□□□ -2.07
RFXAPO00287 ZNF355P-201ENST00000427301 3216 ntBASIC2.09□□□□□ -2.07
RFXAPO00287 MIRLET7G-201ENST00000362280 84 ntBASIC2.09□□□□□ -2.07
RFXAPO00287 RNU6-112P-201ENST00000363599 104 ntBASIC2.09□□□□□ -2.07
RFXAPO00287 SNORA67.1-201ENST00000364749 141 ntBASIC2.09□□□□□ -2.07
RFXAPO00287 RNU6-865P-201ENST00000364772 107 ntBASIC2.09□□□□□ -2.07
RFXAPO00287 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.09□□□□□ -2.07
RFXAPO00287 RNU7-153P-201ENST00000516455 62 ntBASIC2.09□□□□□ -2.07
RFXAPO00287 SUB1P4-201ENST00000566062 339 ntBASIC2.09□□□□□ -2.07
RFXAPO00287 MIR3126-201ENST00000577443 74 ntBASIC2.09□□□□□ -2.07
RFXAPO00287 MIR548AO-201ENST00000579992 96 ntBASIC2.09□□□□□ -2.07
RFXAPO00287 BX248123.2-201ENST00000606318 124 ntBASIC2.09□□□□□ -2.07
RFXAPO00287 Z97988.1-201ENST00000637697 135 ntBASIC2.09□□□□□ -2.07
RFXAPO00287 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
RFXAPO00287 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.08
RFXAPO00287 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.09□□□□□ -2.08
RFXAPO00287 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
RFXAPO00287 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.08□□□□□ -2.08
RFXAPO00287 Y_RNA.173-201ENST00000363776 113 ntBASIC2.08□□□□□ -2.08
RFXAPO00287 SNORA2B-201ENST00000384583 137 ntBASIC2.08□□□□□ -2.08
RFXAPO00287 Y_RNA.537-201ENST00000384626 109 ntBASIC2.08□□□□□ -2.08
RFXAPO00287 Y_RNA.565-201ENST00000384719 101 ntBASIC2.08□□□□□ -2.08
RFXAPO00287 MIR518A2-201ENST00000384966 87 ntBASIC2.08□□□□□ -2.08
RFXAPO00287 RNA5SP501-201ENST00000410990 112 ntBASIC2.08□□□□□ -2.08
RFXAPO00287 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.08□□□□□ -2.08
RFXAPO00287 RNU6-917P-201ENST00000516294 104 ntBASIC2.08□□□□□ -2.08
RFXAPO00287 MIR4709-201ENST00000577272 72 ntBASIC2.08□□□□□ -2.08
RFXAPO00287 MIR5694-201ENST00000581190 76 ntBASIC2.08□□□□□ -2.08
RFXAPO00287 MIR4658-201ENST00000584344 65 ntBASIC2.08□□□□□ -2.08
RFXAPO00287 AC012676.2-201ENST00000619258 186 ntBASIC2.08□□□□□ -2.08
RFXAPO00287 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.08□□□□□ -2.08
RFXAPO00287 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
RFXAPO00287 Y_RNA.224-201ENST00000364308 111 ntBASIC2.07□□□□□ -2.08
RFXAPO00287 RNA5SP138-201ENST00000365098 114 ntBASIC2.07□□□□□ -2.08
RFXAPO00287 MIR520A-201ENST00000384862 85 ntBASIC2.07□□□□□ -2.08
RFXAPO00287 SNORA48.1-201ENST00000390879 135 ntBASIC2.07□□□□□ -2.08
RFXAPO00287 RNU2-7P-201ENST00000410794 178 ntBASIC2.07□□□□□ -2.08
RFXAPO00287 AC073261.1-201ENST00000429409 121 ntBASIC2.07□□□□□ -2.08
RFXAPO00287 AC087499.7-201ENST00000441958 109 ntBASIC2.07□□□□□ -2.08
RFXAPO00287 snoU13.16-201ENST00000459350 104 ntBASIC2.07□□□□□ -2.08
RFXAPO00287 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.07□□□□□ -2.08
RFXAPO00287 SNORA74.3-201ENST00000517108 154 ntBASIC2.07□□□□□ -2.08
RFXAPO00287 AC121758.2-201ENST00000553271 193 ntBASIC2.07□□□□□ -2.08
RFXAPO00287 AL513423.1-201ENST00000621695 132 ntBASIC2.07□□□□□ -2.08
RFXAPO00287 Y_RNA.788-201ENST00000622394 112 ntBASIC2.07□□□□□ -2.08
RFXAPO00287 AC084768.2-201ENST00000622736 221 ntBASIC2.07□□□□□ -2.08
RFXAPO00287 AC008133.2-201ENST00000624540 351 ntBASIC2.07□□□□□ -2.08
RFXAPO00287 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
RFXAPO00287 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.06□□□□□ -2.08
RFXAPO00287 RNY1P13-201ENST00000365030 105 ntBASIC2.06□□□□□ -2.08
RFXAPO00287 RNU6-950P-201ENST00000384651 107 ntBASIC2.06□□□□□ -2.08
RFXAPO00287 RNU6ATAC41P-201ENST00000408600 126 ntBASIC2.06□□□□□ -2.08
RFXAPO00287 RNU7-48P-201ENST00000458875 63 ntBASIC2.06□□□□□ -2.08
RFXAPO00287 snoU13.27-201ENST00000459278 104 ntBASIC2.06□□□□□ -2.08
RFXAPO00287 RNU6-90P-201ENST00000606352 106 ntBASIC2.06□□□□□ -2.08
RFXAPO00287 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
RFXAPO00287 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.06□□□□□ -2.08
RFXAPO00287 MIR519C-201ENST00000385053 87 ntBASIC2.05□□□□□ -2.08
RFXAPO00287 AL161932.1-201ENST00000437408 146 ntBASIC2.05□□□□□ -2.08
RFXAPO00287 snoU13.18-201ENST00000459483 104 ntBASIC2.05□□□□□ -2.08
RFXAPO00287 AC104435.1-201ENST00000483483 166 ntBASIC2.05□□□□□ -2.08
RFXAPO00287 AC140658.3-201ENST00000567603 271 ntBASIC2.05□□□□□ -2.08
RFXAPO00287 MIR4764-201ENST00000580680 88 ntBASIC2.05□□□□□ -2.08
RFXAPO00287 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
RFXAPO00287 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
RFXAPO00287 RNU6-478P-201ENST00000363904 110 ntBASIC2.04□□□□□ -2.08
RFXAPO00287 MIR9-3-201ENST00000385084 90 ntBASIC2.04□□□□□ -2.08
RFXAPO00287 RNU4-83P-201ENST00000410863 133 ntBASIC2.04□□□□□ -2.08
RFXAPO00287 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.04□□□□□ -2.08
RFXAPO00287 AC090255.1-201ENST00000495779 349 ntBASIC2.04□□□□□ -2.08
RFXAPO00287 RNU7-41P-201ENST00000515917 61 ntBASIC2.04□□□□□ -2.08
RFXAPO00287 RNA5SP137-201ENST00000516833 135 ntBASIC2.04□□□□□ -2.08
RFXAPO00287 MIR5002-201ENST00000584713 97 ntBASIC2.04□□□□□ -2.08
RFXAPO00287 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.04□□□□□ -2.08
RFXAPO00287 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
RFXAPO00287 MIR424-201ENST00000362227 98 ntBASIC2.03□□□□□ -2.08
RFXAPO00287 RNA5SP133-201ENST00000363368 119 ntBASIC2.03□□□□□ -2.08
RFXAPO00287 SNORD114-10-201ENST00000363409 72 ntBASIC2.03□□□□□ -2.08
RFXAPO00287 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
RFXAPO00287 HMGN2P39-201ENST00000398005 273 ntBASIC2.03□□□□□ -2.08
RFXAPO00287 AC004223.1-201ENST00000479840 271 ntBASIC2.03□□□□□ -2.08
RFXAPO00287 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.03□□□□□ -2.08
RFXAPO00287 AC093729.1-201ENST00000513074 128 ntBASIC2.03□□□□□ -2.08
RFXAPO00287 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.03□□□□□ -2.08
RFXAPO00287 MTND5P40-201ENST00000559945 246 ntBASIC2.03□□□□□ -2.08
RFXAPO00287 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.03□□□□□ -2.08
RFXAPO00287 RNU6-203P-201ENST00000384038 104 ntBASIC2.02□□□□□ -2.09
RFXAPO00287 MIR7-2-201ENST00000384970 110 ntBASIC2.02□□□□□ -2.09
RFXAPO00287 RNA5SP338-201ENST00000410495 85 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 158.3 ms