Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 Y_RNA.430-201ENST00000384081 110 ntBASIC0.36□□□□□ -2.35
CCDC188H7C350 Y_RNA.521-201ENST00000384560 114 ntBASIC0.36□□□□□ -2.35
CCDC188H7C350 SNORA40.8-201ENST00000411034 126 ntBASIC0.36□□□□□ -2.35
CCDC188H7C350 MTND2P23-201ENST00000422990 651 ntBASIC0.36□□□□□ -2.35
CCDC188H7C350 RNU6-893P-201ENST00000458841 100 ntBASIC0.36□□□□□ -2.35
CCDC188H7C350 RNU6-1149P-201ENST00000516810 97 ntBASIC0.36□□□□□ -2.35
CCDC188H7C350 SNORA25.18-201ENST00000607153 114 ntBASIC0.36□□□□□ -2.35
CCDC188H7C350 MIR2909-201ENST00000617113 69 ntBASIC0.36□□□□□ -2.35
CCDC188H7C350 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
CCDC188H7C350 RNA5SP517-201ENST00000364724 117 ntBASIC0.35□□□□□ -2.35
CCDC188H7C350 RNY4P28-201ENST00000365281 93 ntBASIC0.35□□□□□ -2.35
CCDC188H7C350 SNORA62.5-201ENST00000516634 120 ntBASIC0.35□□□□□ -2.35
CCDC188H7C350 AC133485.4-201ENST00000561835 220 ntBASIC0.35□□□□□ -2.35
CCDC188H7C350 AC141846.1-201ENST00000568348 142 ntBASIC0.35□□□□□ -2.35
CCDC188H7C350 MIR3678-201ENST00000578455 94 ntBASIC0.35□□□□□ -2.35
CCDC188H7C350 AC023932.2-201ENST00000603176 175 ntBASIC0.35□□□□□ -2.35
CCDC188H7C350 Y_RNA.121-201ENST00000363309 113 ntBASIC0.34□□□□□ -2.36
CCDC188H7C350 RNA5SP62-201ENST00000363457 110 ntBASIC0.34□□□□□ -2.36
CCDC188H7C350 RNU6-978P-201ENST00000364371 103 ntBASIC0.34□□□□□ -2.36
CCDC188H7C350 SNORA18-201ENST00000384416 132 ntBASIC0.34□□□□□ -2.36
CCDC188H7C350 RNA5SP63-201ENST00000391225 112 ntBASIC0.34□□□□□ -2.36
CCDC188H7C350 RNU6-327P-201ENST00000516270 127 ntBASIC0.34□□□□□ -2.36
CCDC188H7C350 AC022523.2-201ENST00000561045 150 ntBASIC0.34□□□□□ -2.36
CCDC188H7C350 Y_RNA.13-201ENST00000362403 112 ntBASIC0.33□□□□□ -2.36
CCDC188H7C350 Y_RNA.562-201ENST00000384695 113 ntBASIC0.33□□□□□ -2.36
CCDC188H7C350 MIR568-201ENST00000385036 95 ntBASIC0.33□□□□□ -2.36
CCDC188H7C350 MIR518A1-201ENST00000385068 85 ntBASIC0.33□□□□□ -2.36
CCDC188H7C350 MIR624-201ENST00000385217 97 ntBASIC0.33□□□□□ -2.36
CCDC188H7C350 Y_RNA.617-201ENST00000410920 90 ntBASIC0.33□□□□□ -2.36
CCDC188H7C350 MTCYBP9-201ENST00000431021 303 ntBASIC0.33□□□□□ -2.36
CCDC188H7C350 RNA5SP134-201ENST00000516492 96 ntBASIC0.33□□□□□ -2.36
CCDC188H7C350 AP003327.1-201ENST00000529684 127 ntBASIC0.33□□□□□ -2.36
CCDC188H7C350 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.33□□□□□ -2.36
CCDC188H7C350 Y_RNA.280-201ENST00000364765 112 ntBASIC0.32□□□□□ -2.36
CCDC188H7C350 Y_RNA.626-201ENST00000411288 95 ntBASIC0.32□□□□□ -2.36
CCDC188H7C350 AL118496.2-201ENST00000448300 230 ntBASIC0.32□□□□□ -2.36
CCDC188H7C350 MIR8066-201ENST00000617280 78 ntBASIC0.32□□□□□ -2.36
CCDC188H7C350 AC090625.1-201ENST00000357130 210 ntBASIC0.31□□□□□ -2.36
CCDC188H7C350 Y_RNA.42-201ENST00000362660 108 ntBASIC0.31□□□□□ -2.36
CCDC188H7C350 Y_RNA.133-201ENST00000363428 110 ntBASIC0.31□□□□□ -2.36
CCDC188H7C350 RNU6-1229P-201ENST00000364295 107 ntBASIC0.31□□□□□ -2.36
CCDC188H7C350 Y_RNA.350-201ENST00000365409 98 ntBASIC0.31□□□□□ -2.36
CCDC188H7C350 RNY1P6-201ENST00000384193 109 ntBASIC0.31□□□□□ -2.36
CCDC188H7C350 Y_RNA.539-201ENST00000384635 107 ntBASIC0.31□□□□□ -2.36
CCDC188H7C350 U8.15-201ENST00000390947 134 ntBASIC0.31□□□□□ -2.36
CCDC188H7C350 RNU5E-9P-201ENST00000411164 104 ntBASIC0.31□□□□□ -2.36
CCDC188H7C350 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.31□□□□□ -2.36
CCDC188H7C350 SCARNA15-202ENST00000516881 127 ntBASIC0.31□□□□□ -2.36
CCDC188H7C350 DEFB131E-201ENST00000532329 154 ntBASIC0.31□□□□□ -2.36
CCDC188H7C350 MIR4308-201ENST00000580634 81 ntBASIC0.31□□□□□ -2.36
CCDC188H7C350 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.31□□□□□ -2.36
CCDC188H7C350 MIR6082-201ENST00000613604 109 ntBASIC0.31□□□□□ -2.36
CCDC188H7C350 MIR6841-201ENST00000637129 72 ntBASIC0.31□□□□□ -2.36
CCDC188H7C350 Y_RNA.478-201ENST00000384358 107 ntBASIC0.3□□□□□ -2.36
CCDC188H7C350 SNORA8.2-201ENST00000384372 139 ntBASIC0.3□□□□□ -2.36
CCDC188H7C350 AL512326.2-201ENST00000426359 151 ntBASIC0.3□□□□□ -2.36
CCDC188H7C350 MIR4514-201ENST00000581410 57 ntBASIC0.3□□□□□ -2.36
CCDC188H7C350 MTND5P32-201ENST00000560711 1802 ntBASIC0.29□□□□□ -2.36
CCDC188H7C350 Y_RNA.20-201ENST00000362479 113 ntBASIC0.29□□□□□ -2.36
CCDC188H7C350 RNU6-275P-201ENST00000364910 107 ntBASIC0.29□□□□□ -2.36
CCDC188H7C350 RNU6-949P-201ENST00000384040 107 ntBASIC0.29□□□□□ -2.36
CCDC188H7C350 MIR644A-201ENST00000385262 94 ntBASIC0.29□□□□□ -2.36
CCDC188H7C350 Y_RNA.668-201ENST00000516233 93 ntBASIC0.29□□□□□ -2.36
CCDC188H7C350 RNU4-71P-201ENST00000516258 113 ntBASIC0.29□□□□□ -2.36
CCDC188H7C350 Y_RNA.697-201ENST00000516776 113 ntBASIC0.29□□□□□ -2.36
CCDC188H7C350 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.29□□□□□ -2.36
CCDC188H7C350 MIR3128-201ENST00000581957 66 ntBASIC0.29□□□□□ -2.36
CCDC188H7C350 MIR103A1-201ENST00000362165 78 ntBASIC0.28□□□□□ -2.36
CCDC188H7C350 Y_RNA.174-201ENST00000363781 105 ntBASIC0.28□□□□□ -2.36
CCDC188H7C350 SNORA20.1-201ENST00000364790 130 ntBASIC0.28□□□□□ -2.36
CCDC188H7C350 RNU6-1327P-201ENST00000365302 105 ntBASIC0.28□□□□□ -2.36
CCDC188H7C350 RNU6-1336P-201ENST00000383886 109 ntBASIC0.28□□□□□ -2.36
CCDC188H7C350 SNORD58.1-201ENST00000391313 66 ntBASIC0.28□□□□□ -2.36
CCDC188H7C350 RNU6-1086P-201ENST00000410930 100 ntBASIC0.28□□□□□ -2.36
CCDC188H7C350 AL022718.1-201ENST00000412004 84 ntBASIC0.28□□□□□ -2.36
CCDC188H7C350 SNRPGP12-201ENST00000449481 213 ntBASIC0.28□□□□□ -2.36
CCDC188H7C350 RNU7-113P-201ENST00000459273 62 ntBASIC0.28□□□□□ -2.36
CCDC188H7C350 RNA5SP476-201ENST00000516613 103 ntBASIC0.28□□□□□ -2.36
CCDC188H7C350 MIR4491-201ENST00000581087 68 ntBASIC0.28□□□□□ -2.36
CCDC188H7C350 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.27□□□□□ -2.37
CCDC188H7C350 RNU6-1099P-201ENST00000363533 107 ntBASIC0.27□□□□□ -2.37
CCDC188H7C350 Y_RNA.162-201ENST00000363683 102 ntBASIC0.27□□□□□ -2.37
CCDC188H7C350 Y_RNA.412-201ENST00000384001 104 ntBASIC0.27□□□□□ -2.37
CCDC188H7C350 AC073261.1-201ENST00000429409 121 ntBASIC0.27□□□□□ -2.37
CCDC188H7C350 RNU6-1194P-201ENST00000516208 104 ntBASIC0.27□□□□□ -2.37
CCDC188H7C350 RNU6-1045P-201ENST00000516321 107 ntBASIC0.27□□□□□ -2.37
CCDC188H7C350 SCARNA15.1-201ENST00000516384 125 ntBASIC0.27□□□□□ -2.37
CCDC188H7C350 Y_RNA.680-201ENST00000516441 93 ntBASIC0.27□□□□□ -2.37
CCDC188H7C350 RNA5SP285-201ENST00000516619 119 ntBASIC0.27□□□□□ -2.37
CCDC188H7C350 MRPS18CP4-201ENST00000535821 231 ntBASIC0.27□□□□□ -2.37
CCDC188H7C350 AC062037.2-201ENST00000610137 73 ntBASIC0.27□□□□□ -2.37
CCDC188H7C350 U6.106-201ENST00000636360 105 ntBASIC0.27□□□□□ -2.37
CCDC188H7C350 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.26□□□□□ -2.37
CCDC188H7C350 RNU6-35P-201ENST00000384530 107 ntBASIC0.26□□□□□ -2.37
CCDC188H7C350 RNU6-535P-201ENST00000384722 107 ntBASIC0.26□□□□□ -2.37
CCDC188H7C350 Y_RNA.588-201ENST00000391254 102 ntBASIC0.26□□□□□ -2.37
CCDC188H7C350 RNU6-765P-201ENST00000516916 99 ntBASIC0.26□□□□□ -2.37
CCDC188H7C350 Y_RNA.32-201ENST00000362589 110 ntBASIC0.25□□□□□ -2.37
CCDC188H7C350 Y_RNA.60-201ENST00000362831 98 ntBASIC0.25□□□□□ -2.37
CCDC188H7C350 Y_RNA.171-201ENST00000363760 102 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 177.6 ms