Protein–RNA interactions for Protein: E9PKD4

NPIPA5, Nuclear pore complex-interacting protein family member A5, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA5E9PKD4 Y_RNA.680-201ENST00000516441 93 ntBASIC0.33□□□□□ -2.36
NPIPA5E9PKD4 SCARNA15-202ENST00000516881 127 ntBASIC0.33□□□□□ -2.36
NPIPA5E9PKD4 RNA5SP94-201ENST00000516917 108 ntBASIC0.33□□□□□ -2.36
NPIPA5E9PKD4 SNORA25.18-201ENST00000607153 114 ntBASIC0.33□□□□□ -2.36
NPIPA5E9PKD4 MIR8066-201ENST00000617280 78 ntBASIC0.33□□□□□ -2.36
NPIPA5E9PKD4 MTND5P32-201ENST00000560711 1802 ntBASIC0.32□□□□□ -2.36
NPIPA5E9PKD4 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
NPIPA5E9PKD4 MIR103A1-201ENST00000362165 78 ntBASIC0.32□□□□□ -2.36
NPIPA5E9PKD4 Y_RNA.30-201ENST00000362572 97 ntBASIC0.32□□□□□ -2.36
NPIPA5E9PKD4 RNA5SP457-201ENST00000363657 124 ntBASIC0.32□□□□□ -2.36
NPIPA5E9PKD4 SNORA72.6-201ENST00000384520 129 ntBASIC0.32□□□□□ -2.36
NPIPA5E9PKD4 AL118496.2-201ENST00000448300 230 ntBASIC0.32□□□□□ -2.36
NPIPA5E9PKD4 AC133485.4-201ENST00000561835 220 ntBASIC0.32□□□□□ -2.36
NPIPA5E9PKD4 Y_RNA.42-201ENST00000362660 108 ntBASIC0.31□□□□□ -2.36
NPIPA5E9PKD4 Y_RNA.521-201ENST00000384560 114 ntBASIC0.31□□□□□ -2.36
NPIPA5E9PKD4 Y_RNA.567-201ENST00000384736 106 ntBASIC0.31□□□□□ -2.36
NPIPA5E9PKD4 MIR518A1-201ENST00000385068 85 ntBASIC0.31□□□□□ -2.36
NPIPA5E9PKD4 SCARNA15.1-201ENST00000516384 125 ntBASIC0.31□□□□□ -2.36
NPIPA5E9PKD4 MIR4491-201ENST00000581087 68 ntBASIC0.31□□□□□ -2.36
NPIPA5E9PKD4 MIR4514-201ENST00000581410 57 ntBASIC0.31□□□□□ -2.36
NPIPA5E9PKD4 U6.106-201ENST00000636360 105 ntBASIC0.31□□□□□ -2.36
NPIPA5E9PKD4 MIR6841-201ENST00000637129 72 ntBASIC0.31□□□□□ -2.36
NPIPA5E9PKD4 AC090625.1-201ENST00000357130 210 ntBASIC0.3□□□□□ -2.36
NPIPA5E9PKD4 Y_RNA.20-201ENST00000362479 113 ntBASIC0.3□□□□□ -2.36
NPIPA5E9PKD4 Y_RNA.121-201ENST00000363309 113 ntBASIC0.3□□□□□ -2.36
NPIPA5E9PKD4 Y_RNA.162-201ENST00000363683 102 ntBASIC0.3□□□□□ -2.36
NPIPA5E9PKD4 Y_RNA.171-201ENST00000363760 102 ntBASIC0.3□□□□□ -2.36
NPIPA5E9PKD4 Y_RNA.350-201ENST00000365409 98 ntBASIC0.3□□□□□ -2.36
NPIPA5E9PKD4 Y_RNA.556-201ENST00000384677 113 ntBASIC0.3□□□□□ -2.36
NPIPA5E9PKD4 MIR624-201ENST00000385217 97 ntBASIC0.3□□□□□ -2.36
NPIPA5E9PKD4 SNORA40.8-201ENST00000411034 126 ntBASIC0.3□□□□□ -2.36
NPIPA5E9PKD4 Y_RNA.668-201ENST00000516233 93 ntBASIC0.3□□□□□ -2.36
NPIPA5E9PKD4 RNU6-1258P-201ENST00000516911 111 ntBASIC0.3□□□□□ -2.36
NPIPA5E9PKD4 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
NPIPA5E9PKD4 AC062037.2-201ENST00000610137 73 ntBASIC0.3□□□□□ -2.36
NPIPA5E9PKD4 AL109933.3-201ENST00000619095 188 ntBASIC0.3□□□□□ -2.36
NPIPA5E9PKD4 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
NPIPA5E9PKD4 Y_RNA.60-201ENST00000362831 98 ntBASIC0.29□□□□□ -2.36
NPIPA5E9PKD4 SNORA25.7-201ENST00000364375 127 ntBASIC0.29□□□□□ -2.36
NPIPA5E9PKD4 Y_RNA.412-201ENST00000384001 104 ntBASIC0.29□□□□□ -2.36
NPIPA5E9PKD4 Y_RNA.588-201ENST00000391254 102 ntBASIC0.29□□□□□ -2.36
NPIPA5E9PKD4 SNORD71-201ENST00000411292 86 ntBASIC0.29□□□□□ -2.36
NPIPA5E9PKD4 RNU6-111P-201ENST00000517179 105 ntBASIC0.29□□□□□ -2.36
NPIPA5E9PKD4 MRPS18CP4-201ENST00000535821 231 ntBASIC0.29□□□□□ -2.36
NPIPA5E9PKD4 MIR6082-201ENST00000613604 109 ntBASIC0.29□□□□□ -2.36
NPIPA5E9PKD4 SNORD44.1-201ENST00000363202 61 ntBASIC0.28□□□□□ -2.36
NPIPA5E9PKD4 RNU6-275P-201ENST00000364910 107 ntBASIC0.28□□□□□ -2.36
NPIPA5E9PKD4 RNY1P13-201ENST00000365030 105 ntBASIC0.28□□□□□ -2.36
NPIPA5E9PKD4 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.28□□□□□ -2.36
NPIPA5E9PKD4 RNU6-469P-201ENST00000516253 101 ntBASIC0.28□□□□□ -2.36
NPIPA5E9PKD4 RNU6-1045P-201ENST00000516321 107 ntBASIC0.28□□□□□ -2.36
NPIPA5E9PKD4 SNORA62.5-201ENST00000516634 120 ntBASIC0.28□□□□□ -2.36
NPIPA5E9PKD4 SNORA25.16-201ENST00000516741 121 ntBASIC0.28□□□□□ -2.36
NPIPA5E9PKD4 AC022523.2-201ENST00000561045 150 ntBASIC0.28□□□□□ -2.36
NPIPA5E9PKD4 Y_RNA.757-201ENST00000578934 114 ntBASIC0.28□□□□□ -2.36
NPIPA5E9PKD4 Y_RNA.85-201ENST00000363014 111 ntBASIC0.27□□□□□ -2.37
NPIPA5E9PKD4 SNORA20.1-201ENST00000364790 130 ntBASIC0.27□□□□□ -2.37
NPIPA5E9PKD4 RNU6-949P-201ENST00000384040 107 ntBASIC0.27□□□□□ -2.37
NPIPA5E9PKD4 RNU6-574P-201ENST00000384265 107 ntBASIC0.27□□□□□ -2.37
NPIPA5E9PKD4 SNORA8.2-201ENST00000384372 139 ntBASIC0.27□□□□□ -2.37
NPIPA5E9PKD4 RNU6-1086P-201ENST00000410930 100 ntBASIC0.27□□□□□ -2.37
NPIPA5E9PKD4 AC096949.1-201ENST00000412047 152 ntBASIC0.27□□□□□ -2.37
NPIPA5E9PKD4 AC108740.1-201ENST00000498629 225 ntBASIC0.27□□□□□ -2.37
NPIPA5E9PKD4 RNU7-79P-201ENST00000516082 62 ntBASIC0.27□□□□□ -2.37
NPIPA5E9PKD4 RNA5SP134-201ENST00000516492 96 ntBASIC0.27□□□□□ -2.37
NPIPA5E9PKD4 MTND5P34-201ENST00000568888 325 ntBASIC0.27□□□□□ -2.37
NPIPA5E9PKD4 uc_338.16-201ENST00000621804 95 ntBASIC0.27□□□□□ -2.37
NPIPA5E9PKD4 Y_RNA.374-201ENST00000365606 101 ntBASIC0.26□□□□□ -2.37
NPIPA5E9PKD4 RNY1P6-201ENST00000384193 109 ntBASIC0.26□□□□□ -2.37
NPIPA5E9PKD4 SNORD58.1-201ENST00000391313 66 ntBASIC0.26□□□□□ -2.37
NPIPA5E9PKD4 RNU5E-9P-201ENST00000411164 104 ntBASIC0.26□□□□□ -2.37
NPIPA5E9PKD4 SNRPGP12-201ENST00000449481 213 ntBASIC0.26□□□□□ -2.37
NPIPA5E9PKD4 RNU4-71P-201ENST00000516258 113 ntBASIC0.26□□□□□ -2.37
NPIPA5E9PKD4 SNORA31.14-201ENST00000516728 116 ntBASIC0.26□□□□□ -2.37
NPIPA5E9PKD4 U4.1-201ENST00000620349 87 ntBASIC0.26□□□□□ -2.37
NPIPA5E9PKD4 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.25□□□□□ -2.37
NPIPA5E9PKD4 Y_RNA.32-201ENST00000362589 110 ntBASIC0.25□□□□□ -2.37
NPIPA5E9PKD4 SNORA36.1-201ENST00000363424 132 ntBASIC0.25□□□□□ -2.37
NPIPA5E9PKD4 SNORD118-201ENST00000363593 134 ntBASIC0.25□□□□□ -2.37
NPIPA5E9PKD4 Y_RNA.307-201ENST00000365022 117 ntBASIC0.25□□□□□ -2.37
NPIPA5E9PKD4 RNU6-1327P-201ENST00000365302 105 ntBASIC0.25□□□□□ -2.37
NPIPA5E9PKD4 Y_RNA.447-201ENST00000384184 113 ntBASIC0.25□□□□□ -2.37
NPIPA5E9PKD4 Y_RNA.470-201ENST00000384307 117 ntBASIC0.25□□□□□ -2.37
NPIPA5E9PKD4 Y_RNA.478-201ENST00000384358 107 ntBASIC0.25□□□□□ -2.37
NPIPA5E9PKD4 Y_RNA.515-201ENST00000384535 112 ntBASIC0.25□□□□□ -2.37
NPIPA5E9PKD4 RNU6-918P-201ENST00000391219 106 ntBASIC0.25□□□□□ -2.37
NPIPA5E9PKD4 AL512326.2-201ENST00000426359 151 ntBASIC0.25□□□□□ -2.37
NPIPA5E9PKD4 DEFB131E-201ENST00000532329 154 ntBASIC0.25□□□□□ -2.37
NPIPA5E9PKD4 MIR4503-201ENST00000582187 83 ntBASIC0.25□□□□□ -2.37
NPIPA5E9PKD4 Y_RNA.52-201ENST00000362760 96 ntBASIC0.24□□□□□ -2.37
NPIPA5E9PKD4 RNU6-1082P-201ENST00000364574 107 ntBASIC0.24□□□□□ -2.37
NPIPA5E9PKD4 RNU6-47P-201ENST00000383866 107 ntBASIC0.24□□□□□ -2.37
NPIPA5E9PKD4 SNORA32-201ENST00000384072 121 ntBASIC0.24□□□□□ -2.37
NPIPA5E9PKD4 RNU6-768P-201ENST00000384683 107 ntBASIC0.24□□□□□ -2.37
NPIPA5E9PKD4 RNA5SP144-201ENST00000410846 116 ntBASIC0.24□□□□□ -2.37
NPIPA5E9PKD4 RNU6-893P-201ENST00000458841 100 ntBASIC0.24□□□□□ -2.37
NPIPA5E9PKD4 RNU7-113P-201ENST00000459273 62 ntBASIC0.24□□□□□ -2.37
NPIPA5E9PKD4 RNU6-1023P-201ENST00000516137 106 ntBASIC0.24□□□□□ -2.37
NPIPA5E9PKD4 Y_RNA.697-201ENST00000516776 113 ntBASIC0.24□□□□□ -2.37
NPIPA5E9PKD4 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.24□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 170.5 ms