Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 AC097510.1-201ENST00000510945 133 ntBASIC-1.69□□□□□ -2.68
TRAV1-2A0A0B4J238 RNU6-1088P-201ENST00000516850 104 ntBASIC-1.69□□□□□ -2.68
TRAV1-2A0A0B4J238 AC006504.6-201ENST00000590142 199 ntBASIC-1.69□□□□□ -2.68
TRAV1-2A0A0B4J238 snoU2_19.2-201ENST00000363024 80 ntBASIC-1.7□□□□□ -2.68
TRAV1-2A0A0B4J238 SNORD115-23-201ENST00000364461 82 ntBASIC-1.7□□□□□ -2.68
TRAV1-2A0A0B4J238 Y_RNA.515-201ENST00000384535 112 ntBASIC-1.7□□□□□ -2.68
TRAV1-2A0A0B4J238 RNU6-1321P-201ENST00000390905 107 ntBASIC-1.7□□□□□ -2.68
TRAV1-2A0A0B4J238 SNORA26.8-201ENST00000391306 124 ntBASIC-1.7□□□□□ -2.68
TRAV1-2A0A0B4J238 MIR548E-201ENST00000408287 88 ntBASIC-1.7□□□□□ -2.68
TRAV1-2A0A0B4J238 RNU6-1156P-201ENST00000410365 100 ntBASIC-1.7□□□□□ -2.68
TRAV1-2A0A0B4J238 snoR1.1-201ENST00000628177 80 ntBASIC-1.7□□□□□ -2.68
TRAV1-2A0A0B4J238 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.71□□□□□ -2.68
TRAV1-2A0A0B4J238 Y_RNA.296-201ENST00000364930 108 ntBASIC-1.71□□□□□ -2.68
TRAV1-2A0A0B4J238 Y_RNA.437-201ENST00000384113 113 ntBASIC-1.71□□□□□ -2.68
TRAV1-2A0A0B4J238 MIR29B1-201ENST00000385015 81 ntBASIC-1.71□□□□□ -2.68
TRAV1-2A0A0B4J238 RPS29P25-201ENST00000481709 171 ntBASIC-1.71□□□□□ -2.68
TRAV1-2A0A0B4J238 AC021146.9-201ENST00000512503 156 ntBASIC-1.71□□□□□ -2.68
TRAV1-2A0A0B4J238 RNU6-864P-201ENST00000516256 108 ntBASIC-1.71□□□□□ -2.68
TRAV1-2A0A0B4J238 AC245505.1-201ENST00000556398 224 ntBASIC-1.71□□□□□ -2.68
TRAV1-2A0A0B4J238 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-1.71□□□□□ -2.68
TRAV1-2A0A0B4J238 AC097639.2-201ENST00000603159 172 ntBASIC-1.71□□□□□ -2.68
TRAV1-2A0A0B4J238 MIR3662-201ENST00000637030 95 ntBASIC-1.71□□□□□ -2.68
TRAV1-2A0A0B4J238 RNA5SP331-201ENST00000364986 107 ntBASIC-1.72□□□□□ -2.68
TRAV1-2A0A0B4J238 RNU6-484P-201ENST00000384016 107 ntBASIC-1.72□□□□□ -2.68
TRAV1-2A0A0B4J238 Y_RNA.447-201ENST00000384184 113 ntBASIC-1.72□□□□□ -2.68
TRAV1-2A0A0B4J238 Y_RNA.462-201ENST00000384268 102 ntBASIC-1.72□□□□□ -2.68
TRAV1-2A0A0B4J238 MIR124-2-201ENST00000385081 109 ntBASIC-1.72□□□□□ -2.68
TRAV1-2A0A0B4J238 RNU6-1248P-201ENST00000391096 64 ntBASIC-1.72□□□□□ -2.68
TRAV1-2A0A0B4J238 Y_RNA.594-201ENST00000410373 140 ntBASIC-1.72□□□□□ -2.68
TRAV1-2A0A0B4J238 AC009161.1-201ENST00000417306 376 ntBASIC-1.72□□□□□ -2.68
TRAV1-2A0A0B4J238 RNU7-113P-201ENST00000459273 62 ntBASIC-1.72□□□□□ -2.68
TRAV1-2A0A0B4J238 MIR4770-201ENST00000579149 58 ntBASIC-1.72□□□□□ -2.68
TRAV1-2A0A0B4J238 MIR4724-201ENST00000579485 89 ntBASIC-1.72□□□□□ -2.68
TRAV1-2A0A0B4J238 AC073114.1-201ENST00000612027 490 ntBASIC-1.72□□□□□ -2.68
TRAV1-2A0A0B4J238 RNU6-99P-201ENST00000364721 107 ntBASIC-1.73□□□□□ -2.69
TRAV1-2A0A0B4J238 Y_RNA.542-201ENST00000384641 111 ntBASIC-1.73□□□□□ -2.69
TRAV1-2A0A0B4J238 RNU6-763P-201ENST00000390865 106 ntBASIC-1.73□□□□□ -2.69
TRAV1-2A0A0B4J238 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC-1.73□□□□□ -2.69
TRAV1-2A0A0B4J238 Y_RNA.601-201ENST00000410500 113 ntBASIC-1.73□□□□□ -2.69
TRAV1-2A0A0B4J238 MIR1468-201ENST00000410600 86 ntBASIC-1.73□□□□□ -2.69
TRAV1-2A0A0B4J238 RNA5SP144-201ENST00000410846 116 ntBASIC-1.73□□□□□ -2.69
TRAV1-2A0A0B4J238 RNA5SP153-201ENST00000516498 76 ntBASIC-1.73□□□□□ -2.69
TRAV1-2A0A0B4J238 RNU6-566P-201ENST00000516790 107 ntBASIC-1.73□□□□□ -2.69
TRAV1-2A0A0B4J238 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC-1.73□□□□□ -2.69
TRAV1-2A0A0B4J238 MIR367-201ENST00000362299 68 ntBASIC-1.74□□□□□ -2.69
TRAV1-2A0A0B4J238 Y_RNA.105-201ENST00000363182 111 ntBASIC-1.74□□□□□ -2.69
TRAV1-2A0A0B4J238 Y_RNA.120-201ENST00000363304 110 ntBASIC-1.74□□□□□ -2.69
TRAV1-2A0A0B4J238 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.74□□□□□ -2.69
TRAV1-2A0A0B4J238 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.74□□□□□ -2.69
TRAV1-2A0A0B4J238 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.74□□□□□ -2.69
TRAV1-2A0A0B4J238 RNU6-1163P-201ENST00000364516 107 ntBASIC-1.74□□□□□ -2.69
TRAV1-2A0A0B4J238 RNU6-540P-201ENST00000384622 101 ntBASIC-1.74□□□□□ -2.69
TRAV1-2A0A0B4J238 RNU6-1050P-201ENST00000410388 107 ntBASIC-1.74□□□□□ -2.69
TRAV1-2A0A0B4J238 RNU2-55P-201ENST00000411146 174 ntBASIC-1.74□□□□□ -2.69
TRAV1-2A0A0B4J238 RNU7-48P-201ENST00000458875 63 ntBASIC-1.74□□□□□ -2.69
TRAV1-2A0A0B4J238 MIR3129-201ENST00000581095 76 ntBASIC-1.74□□□□□ -2.69
TRAV1-2A0A0B4J238 MIR4520-1-201ENST00000582609 70 ntBASIC-1.74□□□□□ -2.69
TRAV1-2A0A0B4J238 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-1.74□□□□□ -2.69
TRAV1-2A0A0B4J238 MIR548O2-201ENST00000616090 70 ntBASIC-1.74□□□□□ -2.69
TRAV1-2A0A0B4J238 AC013791.1-201ENST00000616619 62 ntBASIC-1.74□□□□□ -2.69
TRAV1-2A0A0B4J238 Y_RNA.23-201ENST00000362496 106 ntBASIC-1.75□□□□□ -2.69
TRAV1-2A0A0B4J238 Y_RNA.98-201ENST00000363109 102 ntBASIC-1.75□□□□□ -2.69
TRAV1-2A0A0B4J238 Y_RNA.207-201ENST00000364142 106 ntBASIC-1.75□□□□□ -2.69
TRAV1-2A0A0B4J238 Y_RNA.239-201ENST00000364444 113 ntBASIC-1.75□□□□□ -2.69
TRAV1-2A0A0B4J238 Y_RNA.263-201ENST00000364659 114 ntBASIC-1.75□□□□□ -2.69
TRAV1-2A0A0B4J238 RNU6-1104P-201ENST00000384723 104 ntBASIC-1.75□□□□□ -2.69
TRAV1-2A0A0B4J238 RNU6-332P-201ENST00000391193 108 ntBASIC-1.75□□□□□ -2.69
TRAV1-2A0A0B4J238 MIR889-201ENST00000401280 79 ntBASIC-1.75□□□□□ -2.69
TRAV1-2A0A0B4J238 RNU6-1299P-201ENST00000516316 100 ntBASIC-1.75□□□□□ -2.69
TRAV1-2A0A0B4J238 RNU6-273P-201ENST00000516937 96 ntBASIC-1.75□□□□□ -2.69
TRAV1-2A0A0B4J238 MIR548AE2-201ENST00000583456 67 ntBASIC-1.75□□□□□ -2.69
TRAV1-2A0A0B4J238 MIR6773-201ENST00000612812 74 ntBASIC-1.75□□□□□ -2.69
TRAV1-2A0A0B4J238 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-1.75□□□□□ -2.69
TRAV1-2A0A0B4J238 RNU5E-4P-201ENST00000364931 120 ntBASIC-1.76□□□□□ -2.69
TRAV1-2A0A0B4J238 SNORA62.4-201ENST00000365504 151 ntBASIC-1.76□□□□□ -2.69
TRAV1-2A0A0B4J238 Y_RNA.383-201ENST00000383855 97 ntBASIC-1.76□□□□□ -2.69
TRAV1-2A0A0B4J238 MIR527-201ENST00000385244 85 ntBASIC-1.76□□□□□ -2.69
TRAV1-2A0A0B4J238 SEPT14P3-201ENST00000439401 183 ntBASIC-1.76□□□□□ -2.69
TRAV1-2A0A0B4J238 AL732372.2-207ENST00000445840 183 ntBASIC-1.76□□□□□ -2.69
TRAV1-2A0A0B4J238 SEPT14P2-201ENST00000453405 183 ntBASIC-1.76□□□□□ -2.69
TRAV1-2A0A0B4J238 MIR1270-201ENST00000459320 83 ntBASIC-1.76□□□□□ -2.69
TRAV1-2A0A0B4J238 SEPT14P4-201ENST00000513445 186 ntBASIC-1.76□□□□□ -2.69
TRAV1-2A0A0B4J238 Y_RNA.655-201ENST00000515919 96 ntBASIC-1.76□□□□□ -2.69
TRAV1-2A0A0B4J238 RNU6-191P-201ENST00000516295 94 ntBASIC-1.76□□□□□ -2.69
TRAV1-2A0A0B4J238 RNU7-70P-201ENST00000516941 66 ntBASIC-1.76□□□□□ -2.69
TRAV1-2A0A0B4J238 Y_RNA.715-201ENST00000517082 110 ntBASIC-1.76□□□□□ -2.69
TRAV1-2A0A0B4J238 FO082796.1-201ENST00000523795 183 ntBASIC-1.76□□□□□ -2.69
TRAV1-2A0A0B4J238 U4.2-201ENST00000618561 85 ntBASIC-1.76□□□□□ -2.69
TRAV1-2A0A0B4J238 Y_RNA.127-201ENST00000363386 109 ntBASIC-1.77□□□□□ -2.69
TRAV1-2A0A0B4J238 Y_RNA.353-201ENST00000365440 108 ntBASIC-1.77□□□□□ -2.69
TRAV1-2A0A0B4J238 Y_RNA.380-201ENST00000365663 111 ntBASIC-1.77□□□□□ -2.69
TRAV1-2A0A0B4J238 RNU5A-2P-201ENST00000384337 116 ntBASIC-1.77□□□□□ -2.69
TRAV1-2A0A0B4J238 MIRLET7B-201ENST00000385140 83 ntBASIC-1.77□□□□□ -2.69
TRAV1-2A0A0B4J238 MIR548K-201ENST00000408406 116 ntBASIC-1.77□□□□□ -2.69
TRAV1-2A0A0B4J238 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-1.77□□□□□ -2.69
TRAV1-2A0A0B4J238 AC133104.2-201ENST00000615272 193 ntBASIC-1.77□□□□□ -2.69
TRAV1-2A0A0B4J238 AC084781.2-201ENST00000615568 161 ntBASIC-1.77□□□□□ -2.69
TRAV1-2A0A0B4J238 MIR6818-201ENST00000621576 65 ntBASIC-1.77□□□□□ -2.69
TRAV1-2A0A0B4J238 Z69908.1-201ENST00000622603 247 ntBASIC-1.77□□□□□ -2.69
TRAV1-2A0A0B4J238 U6.92-201ENST00000636464 89 ntBASIC-1.77□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms