Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nr1h3Q9Z0Y9 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC17.35■□□□□ 0.37
Nr1h3Q9Z0Y9 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC17.35■□□□□ 0.37
Nr1h3Q9Z0Y9 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nr1h3Q9Z0Y9 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nr1h3Q9Z0Y9 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nr1h3Q9Z0Y9 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
Nr1h3Q9Z0Y9 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nr1h3Q9Z0Y9 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nr1h3Q9Z0Y9 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nr1h3Q9Z0Y9 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nr1h3Q9Z0Y9 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nr1h3Q9Z0Y9 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Nr1h3Q9Z0Y9 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.34■□□□□ 0.37
Nr1h3Q9Z0Y9 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Nr1h3Q9Z0Y9 Gm8097-201ENSMUST00000117903 829 ntBASIC17.34■□□□□ 0.37
Nr1h3Q9Z0Y9 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nr1h3Q9Z0Y9 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nr1h3Q9Z0Y9 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC17.34■□□□□ 0.37
Nr1h3Q9Z0Y9 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nr1h3Q9Z0Y9 Psmb5-202ENSMUST00000227257 622 ntBASIC17.34■□□□□ 0.37
Nr1h3Q9Z0Y9 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nr1h3Q9Z0Y9 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nr1h3Q9Z0Y9 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nr1h3Q9Z0Y9 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Nr1h3Q9Z0Y9 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nr1h3Q9Z0Y9 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nr1h3Q9Z0Y9 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Nr1h3Q9Z0Y9 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nr1h3Q9Z0Y9 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Nr1h3Q9Z0Y9 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Nr1h3Q9Z0Y9 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Nr1h3Q9Z0Y9 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Nr1h3Q9Z0Y9 Gm5837-201ENSMUST00000191844 1369 ntBASIC17.33■□□□□ 0.36
Nr1h3Q9Z0Y9 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nr1h3Q9Z0Y9 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nr1h3Q9Z0Y9 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC17.33■□□□□ 0.36
Nr1h3Q9Z0Y9 Gm6089-201ENSMUST00000197666 938 ntBASIC17.33■□□□□ 0.36
Nr1h3Q9Z0Y9 AC153937.1-201ENSMUST00000218734 412 ntBASIC17.33■□□□□ 0.36
Nr1h3Q9Z0Y9 AV026068-213ENSMUST00000223675 1171 ntBASIC17.33■□□□□ 0.36
Nr1h3Q9Z0Y9 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nr1h3Q9Z0Y9 Gm15590-201ENSMUST00000078419 552 ntBASIC17.33■□□□□ 0.36
Nr1h3Q9Z0Y9 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nr1h3Q9Z0Y9 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nr1h3Q9Z0Y9 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nr1h3Q9Z0Y9 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nr1h3Q9Z0Y9 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nr1h3Q9Z0Y9 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nr1h3Q9Z0Y9 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nr1h3Q9Z0Y9 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.32■□□□□ 0.36
Nr1h3Q9Z0Y9 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nr1h3Q9Z0Y9 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.32■□□□□ 0.36
Nr1h3Q9Z0Y9 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Nr1h3Q9Z0Y9 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nr1h3Q9Z0Y9 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Nr1h3Q9Z0Y9 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Nr1h3Q9Z0Y9 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC17.32■□□□□ 0.36
Nr1h3Q9Z0Y9 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Nr1h3Q9Z0Y9 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nr1h3Q9Z0Y9 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Nr1h3Q9Z0Y9 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC17.32■□□□□ 0.36
Nr1h3Q9Z0Y9 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC17.32■□□□□ 0.36
Nr1h3Q9Z0Y9 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Nr1h3Q9Z0Y9 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nr1h3Q9Z0Y9 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nr1h3Q9Z0Y9 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Nr1h3Q9Z0Y9 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nr1h3Q9Z0Y9 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Nr1h3Q9Z0Y9 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Nr1h3Q9Z0Y9 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Nr1h3Q9Z0Y9 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nr1h3Q9Z0Y9 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nr1h3Q9Z0Y9 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.31■□□□□ 0.36
Nr1h3Q9Z0Y9 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nr1h3Q9Z0Y9 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
Nr1h3Q9Z0Y9 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nr1h3Q9Z0Y9 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nr1h3Q9Z0Y9 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nr1h3Q9Z0Y9 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nr1h3Q9Z0Y9 Gm11594-201ENSMUST00000122313 162 ntBASIC17.31■□□□□ 0.36
Nr1h3Q9Z0Y9 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
Nr1h3Q9Z0Y9 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC17.31■□□□□ 0.36
Nr1h3Q9Z0Y9 Gm6550-201ENSMUST00000187574 993 ntBASIC17.31■□□□□ 0.36
Nr1h3Q9Z0Y9 Gm5264-201ENSMUST00000190584 848 ntBASIC17.31■□□□□ 0.36
Nr1h3Q9Z0Y9 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nr1h3Q9Z0Y9 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nr1h3Q9Z0Y9 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC17.31■□□□□ 0.36
Nr1h3Q9Z0Y9 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC17.31■□□□□ 0.36
Nr1h3Q9Z0Y9 AC159093.1-201ENSMUST00000227779 380 ntBASIC17.31■□□□□ 0.36
Nr1h3Q9Z0Y9 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nr1h3Q9Z0Y9 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nr1h3Q9Z0Y9 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nr1h3Q9Z0Y9 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Nr1h3Q9Z0Y9 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nr1h3Q9Z0Y9 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nr1h3Q9Z0Y9 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nr1h3Q9Z0Y9 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.31■□□□□ 0.36
Nr1h3Q9Z0Y9 Gm37500-201ENSMUST00000192059 1443 ntBASIC17.3■□□□□ 0.36
Nr1h3Q9Z0Y9 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nr1h3Q9Z0Y9 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms