Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.6□□□□□ -0.23
Col13a1Q9R1N9 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col13a1Q9R1N9 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Col13a1Q9R1N9 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col13a1Q9R1N9 Gm13036-201ENSMUST00000117799 748 ntBASIC13.6□□□□□ -0.23
Col13a1Q9R1N9 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC13.6□□□□□ -0.23
Col13a1Q9R1N9 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC13.6□□□□□ -0.23
Col13a1Q9R1N9 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.6□□□□□ -0.23
Col13a1Q9R1N9 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC13.6□□□□□ -0.23
Col13a1Q9R1N9 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col13a1Q9R1N9 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC13.6□□□□□ -0.23
Col13a1Q9R1N9 Gm6550-201ENSMUST00000187574 993 ntBASIC13.6□□□□□ -0.23
Col13a1Q9R1N9 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC13.6□□□□□ -0.23
Col13a1Q9R1N9 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col13a1Q9R1N9 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Col13a1Q9R1N9 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC13.6□□□□□ -0.23
Col13a1Q9R1N9 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col13a1Q9R1N9 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Col13a1Q9R1N9 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Col13a1Q9R1N9 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col13a1Q9R1N9 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Col13a1Q9R1N9 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Col13a1Q9R1N9 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Col13a1Q9R1N9 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col13a1Q9R1N9 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col13a1Q9R1N9 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col13a1Q9R1N9 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col13a1Q9R1N9 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col13a1Q9R1N9 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Col13a1Q9R1N9 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col13a1Q9R1N9 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col13a1Q9R1N9 Gm13127-201ENSMUST00000118978 1389 ntBASIC13.59□□□□□ -0.23
Col13a1Q9R1N9 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col13a1Q9R1N9 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col13a1Q9R1N9 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Col13a1Q9R1N9 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.59□□□□□ -0.23
Col13a1Q9R1N9 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC13.59□□□□□ -0.23
Col13a1Q9R1N9 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC13.59□□□□□ -0.23
Col13a1Q9R1N9 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC13.59□□□□□ -0.23
Col13a1Q9R1N9 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.59□□□□□ -0.23
Col13a1Q9R1N9 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col13a1Q9R1N9 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col13a1Q9R1N9 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col13a1Q9R1N9 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col13a1Q9R1N9 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.59□□□□□ -0.23
Col13a1Q9R1N9 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Col13a1Q9R1N9 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col13a1Q9R1N9 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Col13a1Q9R1N9 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col13a1Q9R1N9 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Col13a1Q9R1N9 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col13a1Q9R1N9 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col13a1Q9R1N9 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Col13a1Q9R1N9 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col13a1Q9R1N9 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Col13a1Q9R1N9 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col13a1Q9R1N9 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col13a1Q9R1N9 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Col13a1Q9R1N9 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Col13a1Q9R1N9 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Col13a1Q9R1N9 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Col13a1Q9R1N9 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col13a1Q9R1N9 Gm6184-201ENSMUST00000120403 1261 ntBASIC13.58□□□□□ -0.24
Col13a1Q9R1N9 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col13a1Q9R1N9 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col13a1Q9R1N9 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col13a1Q9R1N9 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col13a1Q9R1N9 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC13.58□□□□□ -0.24
Col13a1Q9R1N9 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.58□□□□□ -0.24
Col13a1Q9R1N9 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col13a1Q9R1N9 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC13.58□□□□□ -0.24
Col13a1Q9R1N9 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC13.58□□□□□ -0.24
Col13a1Q9R1N9 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col13a1Q9R1N9 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col13a1Q9R1N9 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col13a1Q9R1N9 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col13a1Q9R1N9 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col13a1Q9R1N9 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Col13a1Q9R1N9 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col13a1Q9R1N9 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col13a1Q9R1N9 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC13.57□□□□□ -0.24
Col13a1Q9R1N9 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col13a1Q9R1N9 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col13a1Q9R1N9 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col13a1Q9R1N9 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col13a1Q9R1N9 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col13a1Q9R1N9 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col13a1Q9R1N9 H2af-ps-201ENSMUST00000119066 295 ntBASIC13.57□□□□□ -0.24
Col13a1Q9R1N9 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col13a1Q9R1N9 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
Col13a1Q9R1N9 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col13a1Q9R1N9 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC13.57□□□□□ -0.24
Col13a1Q9R1N9 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col13a1Q9R1N9 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col13a1Q9R1N9 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col13a1Q9R1N9 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col13a1Q9R1N9 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col13a1Q9R1N9 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC13.57□□□□□ -0.24
Col13a1Q9R1N9 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col13a1Q9R1N9 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms