Protein–RNA interactions for Protein: Q9R1A9

Trex2, Three prime repair exonuclease 2, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex2Q9R1A9 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trex2Q9R1A9 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trex2Q9R1A9 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trex2Q9R1A9 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trex2Q9R1A9 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC13.52□□□□□ -0.25
Trex2Q9R1A9 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trex2Q9R1A9 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trex2Q9R1A9 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trex2Q9R1A9 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trex2Q9R1A9 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trex2Q9R1A9 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trex2Q9R1A9 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trex2Q9R1A9 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trex2Q9R1A9 Phf7-203ENSMUST00000226565 1971 ntBASIC13.51□□□□□ -0.25
Trex2Q9R1A9 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trex2Q9R1A9 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trex2Q9R1A9 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trex2Q9R1A9 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trex2Q9R1A9 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC13.51□□□□□ -0.25
Trex2Q9R1A9 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trex2Q9R1A9 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trex2Q9R1A9 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trex2Q9R1A9 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trex2Q9R1A9 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trex2Q9R1A9 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trex2Q9R1A9 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trex2Q9R1A9 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC13.51□□□□□ -0.25
Trex2Q9R1A9 Gm18115-201ENSMUST00000221209 621 ntBASIC13.51□□□□□ -0.25
Trex2Q9R1A9 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trex2Q9R1A9 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trex2Q9R1A9 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trex2Q9R1A9 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trex2Q9R1A9 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trex2Q9R1A9 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trex2Q9R1A9 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trex2Q9R1A9 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trex2Q9R1A9 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trex2Q9R1A9 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trex2Q9R1A9 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trex2Q9R1A9 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trex2Q9R1A9 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trex2Q9R1A9 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trex2Q9R1A9 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trex2Q9R1A9 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trex2Q9R1A9 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trex2Q9R1A9 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trex2Q9R1A9 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trex2Q9R1A9 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trex2Q9R1A9 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trex2Q9R1A9 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trex2Q9R1A9 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trex2Q9R1A9 Gm45212-201ENSMUST00000205831 3403 ntBASIC13.5□□□□□ -0.25
Trex2Q9R1A9 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trex2Q9R1A9 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trex2Q9R1A9 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Trex2Q9R1A9 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trex2Q9R1A9 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Trex2Q9R1A9 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trex2Q9R1A9 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trex2Q9R1A9 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trex2Q9R1A9 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trex2Q9R1A9 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trex2Q9R1A9 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trex2Q9R1A9 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Trex2Q9R1A9 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trex2Q9R1A9 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trex2Q9R1A9 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trex2Q9R1A9 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trex2Q9R1A9 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trex2Q9R1A9 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trex2Q9R1A9 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trex2Q9R1A9 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Trex2Q9R1A9 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trex2Q9R1A9 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trex2Q9R1A9 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trex2Q9R1A9 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC13.49□□□□□ -0.25
Trex2Q9R1A9 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trex2Q9R1A9 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trex2Q9R1A9 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trex2Q9R1A9 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trex2Q9R1A9 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trex2Q9R1A9 Gfra2-202ENSMUST00000227633 1480 ntBASIC13.49□□□□□ -0.25
Trex2Q9R1A9 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trex2Q9R1A9 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trex2Q9R1A9 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Trex2Q9R1A9 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trex2Q9R1A9 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trex2Q9R1A9 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trex2Q9R1A9 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trex2Q9R1A9 Gm45203-201ENSMUST00000206384 1831 ntBASIC13.49□□□□□ -0.25
Trex2Q9R1A9 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trex2Q9R1A9 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trex2Q9R1A9 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trex2Q9R1A9 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trex2Q9R1A9 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Trex2Q9R1A9 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC13.49□□□□□ -0.25
Trex2Q9R1A9 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trex2Q9R1A9 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trex2Q9R1A9 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trex2Q9R1A9 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms