Protein–RNA interactions for Protein: Q9JJ94

Ssna1, Sjoegren syndrome nuclear autoantigen 1 homolog, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssna1Q9JJ94 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ssna1Q9JJ94 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Ssna1Q9JJ94 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Ssna1Q9JJ94 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ssna1Q9JJ94 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC13.09□□□□□ -0.31
Ssna1Q9JJ94 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ssna1Q9JJ94 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ssna1Q9JJ94 Gm5522-201ENSMUST00000189483 1242 ntBASIC13.09□□□□□ -0.31
Ssna1Q9JJ94 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ssna1Q9JJ94 Gm9847-201ENSMUST00000052528 599 ntBASIC13.09□□□□□ -0.31
Ssna1Q9JJ94 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ssna1Q9JJ94 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Ssna1Q9JJ94 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ssna1Q9JJ94 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Ssna1Q9JJ94 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ssna1Q9JJ94 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ssna1Q9JJ94 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ssna1Q9JJ94 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ssna1Q9JJ94 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
Ssna1Q9JJ94 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ssna1Q9JJ94 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ssna1Q9JJ94 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ssna1Q9JJ94 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ssna1Q9JJ94 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ssna1Q9JJ94 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ssna1Q9JJ94 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ssna1Q9JJ94 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ssna1Q9JJ94 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ssna1Q9JJ94 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ssna1Q9JJ94 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ssna1Q9JJ94 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
Ssna1Q9JJ94 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.08□□□□□ -0.32
Ssna1Q9JJ94 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC13.08□□□□□ -0.32
Ssna1Q9JJ94 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ssna1Q9JJ94 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC13.08□□□□□ -0.32
Ssna1Q9JJ94 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC13.08□□□□□ -0.32
Ssna1Q9JJ94 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Ssna1Q9JJ94 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ssna1Q9JJ94 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC13.08□□□□□ -0.32
Ssna1Q9JJ94 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Ssna1Q9JJ94 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ssna1Q9JJ94 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
Ssna1Q9JJ94 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ssna1Q9JJ94 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ssna1Q9JJ94 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Ssna1Q9JJ94 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ssna1Q9JJ94 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.08□□□□□ -0.32
Ssna1Q9JJ94 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Ssna1Q9JJ94 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ssna1Q9JJ94 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Ssna1Q9JJ94 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ssna1Q9JJ94 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ssna1Q9JJ94 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ssna1Q9JJ94 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.08□□□□□ -0.32
Ssna1Q9JJ94 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC13.08□□□□□ -0.32
Ssna1Q9JJ94 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ssna1Q9JJ94 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
Ssna1Q9JJ94 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ssna1Q9JJ94 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ssna1Q9JJ94 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ssna1Q9JJ94 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ssna1Q9JJ94 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.07□□□□□ -0.32
Ssna1Q9JJ94 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ssna1Q9JJ94 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ssna1Q9JJ94 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ssna1Q9JJ94 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC13.07□□□□□ -0.32
Ssna1Q9JJ94 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ssna1Q9JJ94 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ssna1Q9JJ94 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ssna1Q9JJ94 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ssna1Q9JJ94 Gm13401-201ENSMUST00000117074 291 ntBASIC13.07□□□□□ -0.32
Ssna1Q9JJ94 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Ssna1Q9JJ94 Smad6-203ENSMUST00000179458 273 ntBASIC13.07□□□□□ -0.32
Ssna1Q9JJ94 Gm9207-201ENSMUST00000198773 1115 ntBASIC13.07□□□□□ -0.32
Ssna1Q9JJ94 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC13.07□□□□□ -0.32
Ssna1Q9JJ94 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ssna1Q9JJ94 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ssna1Q9JJ94 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ssna1Q9JJ94 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ssna1Q9JJ94 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.07□□□□□ -0.32
Ssna1Q9JJ94 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Ssna1Q9JJ94 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.07□□□□□ -0.32
Ssna1Q9JJ94 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Ssna1Q9JJ94 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ssna1Q9JJ94 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
Ssna1Q9JJ94 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ssna1Q9JJ94 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ssna1Q9JJ94 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ssna1Q9JJ94 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ssna1Q9JJ94 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ssna1Q9JJ94 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Ssna1Q9JJ94 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Ssna1Q9JJ94 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ssna1Q9JJ94 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.06□□□□□ -0.32
Ssna1Q9JJ94 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ssna1Q9JJ94 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.06□□□□□ -0.32
Ssna1Q9JJ94 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Ssna1Q9JJ94 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ssna1Q9JJ94 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ssna1Q9JJ94 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms