Protein–RNA interactions for Protein: Q9ERK0

Ripk4, Receptor-interacting serine/threonine-protein kinase 4, mousemouse

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk4Q9ERK0 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ripk4Q9ERK0 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ripk4Q9ERK0 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Ripk4Q9ERK0 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC19.47■□□□□ 0.71
Ripk4Q9ERK0 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ripk4Q9ERK0 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ripk4Q9ERK0 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC19.46■□□□□ 0.71
Ripk4Q9ERK0 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC19.46■□□□□ 0.71
Ripk4Q9ERK0 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC19.46■□□□□ 0.71
Ripk4Q9ERK0 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ripk4Q9ERK0 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ripk4Q9ERK0 Gm9889-202ENSMUST00000206983 1577 ntBASIC19.46■□□□□ 0.71
Ripk4Q9ERK0 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ripk4Q9ERK0 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ripk4Q9ERK0 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC19.46■□□□□ 0.71
Ripk4Q9ERK0 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC19.46■□□□□ 0.71
Ripk4Q9ERK0 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ripk4Q9ERK0 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ripk4Q9ERK0 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ripk4Q9ERK0 Gm14026-201ENSMUST00000120625 1789 ntBASIC19.46■□□□□ 0.71
Ripk4Q9ERK0 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ripk4Q9ERK0 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Ripk4Q9ERK0 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ripk4Q9ERK0 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ripk4Q9ERK0 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ripk4Q9ERK0 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Ripk4Q9ERK0 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC19.45■□□□□ 0.7
Ripk4Q9ERK0 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Ripk4Q9ERK0 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Ripk4Q9ERK0 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Ripk4Q9ERK0 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ripk4Q9ERK0 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ripk4Q9ERK0 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ripk4Q9ERK0 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Ripk4Q9ERK0 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Ripk4Q9ERK0 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ripk4Q9ERK0 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ripk4Q9ERK0 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ripk4Q9ERK0 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC19.45■□□□□ 0.7
Ripk4Q9ERK0 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC19.45■□□□□ 0.7
Ripk4Q9ERK0 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC19.45■□□□□ 0.7
Ripk4Q9ERK0 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
Ripk4Q9ERK0 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ripk4Q9ERK0 Vti1a-206ENSMUST00000225529 1244 ntBASIC19.45■□□□□ 0.7
Ripk4Q9ERK0 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ripk4Q9ERK0 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ripk4Q9ERK0 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ripk4Q9ERK0 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Ripk4Q9ERK0 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC19.45■□□□□ 0.7
Ripk4Q9ERK0 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ripk4Q9ERK0 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ripk4Q9ERK0 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ripk4Q9ERK0 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
Ripk4Q9ERK0 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ripk4Q9ERK0 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ripk4Q9ERK0 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ripk4Q9ERK0 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ripk4Q9ERK0 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ripk4Q9ERK0 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ripk4Q9ERK0 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC19.44■□□□□ 0.7
Ripk4Q9ERK0 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ripk4Q9ERK0 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ripk4Q9ERK0 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ripk4Q9ERK0 Gm1401-201ENSMUST00000122048 772 ntBASIC19.44■□□□□ 0.7
Ripk4Q9ERK0 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ripk4Q9ERK0 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC19.44■□□□□ 0.7
Ripk4Q9ERK0 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC19.44■□□□□ 0.7
Ripk4Q9ERK0 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC19.44■□□□□ 0.7
Ripk4Q9ERK0 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ripk4Q9ERK0 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ripk4Q9ERK0 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ripk4Q9ERK0 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ripk4Q9ERK0 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC19.44■□□□□ 0.7
Ripk4Q9ERK0 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ripk4Q9ERK0 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ripk4Q9ERK0 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ripk4Q9ERK0 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ripk4Q9ERK0 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ripk4Q9ERK0 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ripk4Q9ERK0 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ripk4Q9ERK0 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ripk4Q9ERK0 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Ripk4Q9ERK0 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ripk4Q9ERK0 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ripk4Q9ERK0 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ripk4Q9ERK0 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC19.43■□□□□ 0.7
Ripk4Q9ERK0 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ripk4Q9ERK0 Gm7507-201ENSMUST00000183053 1008 ntBASIC19.43■□□□□ 0.7
Ripk4Q9ERK0 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ripk4Q9ERK0 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC19.43■□□□□ 0.7
Ripk4Q9ERK0 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Ripk4Q9ERK0 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ripk4Q9ERK0 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC19.43■□□□□ 0.7
Ripk4Q9ERK0 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Ripk4Q9ERK0 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Ripk4Q9ERK0 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ripk4Q9ERK0 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ripk4Q9ERK0 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ripk4Q9ERK0 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Ripk4Q9ERK0 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms