Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx2-4Q9EQM3 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx2-4Q9EQM3 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nkx2-4Q9EQM3 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.37■□□□□ 0.21
Nkx2-4Q9EQM3 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx2-4Q9EQM3 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Nkx2-4Q9EQM3 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.37■□□□□ 0.21
Nkx2-4Q9EQM3 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx2-4Q9EQM3 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx2-4Q9EQM3 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx2-4Q9EQM3 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx2-4Q9EQM3 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx2-4Q9EQM3 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC16.37■□□□□ 0.21
Nkx2-4Q9EQM3 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Nkx2-4Q9EQM3 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC16.37■□□□□ 0.21
Nkx2-4Q9EQM3 Mir6977-201ENSMUST00000184960 64 ntBASIC16.37■□□□□ 0.21
Nkx2-4Q9EQM3 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC16.37■□□□□ 0.21
Nkx2-4Q9EQM3 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx2-4Q9EQM3 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx2-4Q9EQM3 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx2-4Q9EQM3 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Nkx2-4Q9EQM3 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx2-4Q9EQM3 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx2-4Q9EQM3 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx2-4Q9EQM3 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx2-4Q9EQM3 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Nkx2-4Q9EQM3 Gm5366-201ENSMUST00000215494 1338 ntBASIC16.37■□□□□ 0.21
Nkx2-4Q9EQM3 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx2-4Q9EQM3 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx2-4Q9EQM3 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx2-4Q9EQM3 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx2-4Q9EQM3 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Nkx2-4Q9EQM3 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nkx2-4Q9EQM3 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Nkx2-4Q9EQM3 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.36■□□□□ 0.21
Nkx2-4Q9EQM3 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Nkx2-4Q9EQM3 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nkx2-4Q9EQM3 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC16.36■□□□□ 0.21
Nkx2-4Q9EQM3 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC16.36■□□□□ 0.21
Nkx2-4Q9EQM3 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC16.36■□□□□ 0.21
Nkx2-4Q9EQM3 Rprl2-201ENSMUST00000157150 290 ntBASIC16.36■□□□□ 0.21
Nkx2-4Q9EQM3 Gm23547-201ENSMUST00000158210 271 ntBASIC16.36■□□□□ 0.21
Nkx2-4Q9EQM3 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC16.36■□□□□ 0.21
Nkx2-4Q9EQM3 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC16.36■□□□□ 0.21
Nkx2-4Q9EQM3 Gm18489-201ENSMUST00000172565 551 ntBASIC16.36■□□□□ 0.21
Nkx2-4Q9EQM3 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Nkx2-4Q9EQM3 Gm18889-201ENSMUST00000174284 929 ntBASIC16.36■□□□□ 0.21
Nkx2-4Q9EQM3 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Nkx2-4Q9EQM3 Gm43125-201ENSMUST00000201724 730 ntBASIC16.36■□□□□ 0.21
Nkx2-4Q9EQM3 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nkx2-4Q9EQM3 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Nkx2-4Q9EQM3 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nkx2-4Q9EQM3 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nkx2-4Q9EQM3 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nkx2-4Q9EQM3 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nkx2-4Q9EQM3 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nkx2-4Q9EQM3 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Nkx2-4Q9EQM3 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx2-4Q9EQM3 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx2-4Q9EQM3 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx2-4Q9EQM3 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx2-4Q9EQM3 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.35■□□□□ 0.21
Nkx2-4Q9EQM3 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx2-4Q9EQM3 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx2-4Q9EQM3 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Nkx2-4Q9EQM3 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx2-4Q9EQM3 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx2-4Q9EQM3 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC16.35■□□□□ 0.21
Nkx2-4Q9EQM3 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC16.35■□□□□ 0.21
Nkx2-4Q9EQM3 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC16.35■□□□□ 0.21
Nkx2-4Q9EQM3 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx2-4Q9EQM3 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx2-4Q9EQM3 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC16.35■□□□□ 0.21
Nkx2-4Q9EQM3 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx2-4Q9EQM3 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC16.35■□□□□ 0.21
Nkx2-4Q9EQM3 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx2-4Q9EQM3 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx2-4Q9EQM3 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Nkx2-4Q9EQM3 Grk6-207ENSMUST00000225925 2769 ntBASIC16.35■□□□□ 0.21
Nkx2-4Q9EQM3 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Nkx2-4Q9EQM3 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx2-4Q9EQM3 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx2-4Q9EQM3 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx2-4Q9EQM3 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx2-4Q9EQM3 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx2-4Q9EQM3 Mir449b-201ENSMUST00000104833 80 ntBASIC16.34■□□□□ 0.21
Nkx2-4Q9EQM3 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC16.34■□□□□ 0.21
Nkx2-4Q9EQM3 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx2-4Q9EQM3 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC16.34■□□□□ 0.21
Nkx2-4Q9EQM3 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx2-4Q9EQM3 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx2-4Q9EQM3 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx2-4Q9EQM3 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Nkx2-4Q9EQM3 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Nkx2-4Q9EQM3 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx2-4Q9EQM3 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx2-4Q9EQM3 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx2-4Q9EQM3 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.34■□□□□ 0.21
Nkx2-4Q9EQM3 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Nkx2-4Q9EQM3 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms