Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Stag1Q9D3E6 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Stag1Q9D3E6 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC19.02■□□□□ 0.64
Stag1Q9D3E6 Gm27646-201ENSMUST00000183989 110 ntBASIC19.02■□□□□ 0.64
Stag1Q9D3E6 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Stag1Q9D3E6 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC19.02■□□□□ 0.64
Stag1Q9D3E6 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Stag1Q9D3E6 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Stag1Q9D3E6 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
Stag1Q9D3E6 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Stag1Q9D3E6 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Stag1Q9D3E6 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Stag1Q9D3E6 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC19.02■□□□□ 0.63
Stag1Q9D3E6 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Stag1Q9D3E6 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Stag1Q9D3E6 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC19.02■□□□□ 0.63
Stag1Q9D3E6 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Stag1Q9D3E6 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Stag1Q9D3E6 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
Stag1Q9D3E6 Gm8784-201ENSMUST00000222096 1435 ntBASIC19.01■□□□□ 0.63
Stag1Q9D3E6 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Stag1Q9D3E6 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Stag1Q9D3E6 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Stag1Q9D3E6 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Stag1Q9D3E6 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Stag1Q9D3E6 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Stag1Q9D3E6 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Stag1Q9D3E6 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Stag1Q9D3E6 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC19.01■□□□□ 0.63
Stag1Q9D3E6 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC19.01■□□□□ 0.63
Stag1Q9D3E6 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Stag1Q9D3E6 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Stag1Q9D3E6 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Stag1Q9D3E6 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Stag1Q9D3E6 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Stag1Q9D3E6 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Stag1Q9D3E6 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Stag1Q9D3E6 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC19■□□□□ 0.63
Stag1Q9D3E6 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC19■□□□□ 0.63
Stag1Q9D3E6 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
Stag1Q9D3E6 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Stag1Q9D3E6 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC19■□□□□ 0.63
Stag1Q9D3E6 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC19■□□□□ 0.63
Stag1Q9D3E6 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Stag1Q9D3E6 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
Stag1Q9D3E6 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Stag1Q9D3E6 Gm2213-201ENSMUST00000197485 688 ntBASIC19■□□□□ 0.63
Stag1Q9D3E6 AC084391.1-201ENSMUST00000200651 141 ntBASIC19■□□□□ 0.63
Stag1Q9D3E6 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC19■□□□□ 0.63
Stag1Q9D3E6 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC19■□□□□ 0.63
Stag1Q9D3E6 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC19■□□□□ 0.63
Stag1Q9D3E6 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC19■□□□□ 0.63
Stag1Q9D3E6 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC19■□□□□ 0.63
Stag1Q9D3E6 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC19■□□□□ 0.63
Stag1Q9D3E6 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Stag1Q9D3E6 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC19■□□□□ 0.63
Stag1Q9D3E6 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC19■□□□□ 0.63
Stag1Q9D3E6 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Stag1Q9D3E6 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC19■□□□□ 0.63
Stag1Q9D3E6 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC19■□□□□ 0.63
Stag1Q9D3E6 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Stag1Q9D3E6 AC115863.1-201ENSMUST00000214815 1813 ntBASIC19■□□□□ 0.63
Stag1Q9D3E6 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Stag1Q9D3E6 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Stag1Q9D3E6 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Stag1Q9D3E6 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Stag1Q9D3E6 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Stag1Q9D3E6 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Stag1Q9D3E6 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Stag1Q9D3E6 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Stag1Q9D3E6 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Stag1Q9D3E6 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
Stag1Q9D3E6 Gm9727-201ENSMUST00000161387 555 ntBASIC18.99■□□□□ 0.63
Stag1Q9D3E6 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC18.99■□□□□ 0.63
Stag1Q9D3E6 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC18.99■□□□□ 0.63
Stag1Q9D3E6 AC117588.1-201ENSMUST00000228510 999 ntBASIC18.99■□□□□ 0.63
Stag1Q9D3E6 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Stag1Q9D3E6 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Stag1Q9D3E6 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.99■□□□□ 0.63
Stag1Q9D3E6 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Stag1Q9D3E6 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Stag1Q9D3E6 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Stag1Q9D3E6 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Stag1Q9D3E6 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Stag1Q9D3E6 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Stag1Q9D3E6 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Stag1Q9D3E6 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Stag1Q9D3E6 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Stag1Q9D3E6 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Stag1Q9D3E6 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Stag1Q9D3E6 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.98■□□□□ 0.63
Stag1Q9D3E6 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Stag1Q9D3E6 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Stag1Q9D3E6 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Stag1Q9D3E6 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC18.98■□□□□ 0.63
Stag1Q9D3E6 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Stag1Q9D3E6 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Stag1Q9D3E6 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC18.98■□□□□ 0.63
Stag1Q9D3E6 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Stag1Q9D3E6 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms