Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
Chaf1bQ9D0N7 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chaf1bQ9D0N7 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chaf1bQ9D0N7 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chaf1bQ9D0N7 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chaf1bQ9D0N7 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chaf1bQ9D0N7 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chaf1bQ9D0N7 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Chaf1bQ9D0N7 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chaf1bQ9D0N7 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chaf1bQ9D0N7 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chaf1bQ9D0N7 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chaf1bQ9D0N7 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
Chaf1bQ9D0N7 Gm12527-201ENSMUST00000117967 564 ntBASIC15.09■□□□□ 0.01
Chaf1bQ9D0N7 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Chaf1bQ9D0N7 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chaf1bQ9D0N7 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chaf1bQ9D0N7 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Chaf1bQ9D0N7 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Chaf1bQ9D0N7 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chaf1bQ9D0N7 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chaf1bQ9D0N7 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Chaf1bQ9D0N7 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chaf1bQ9D0N7 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.09■□□□□ 0.01
Chaf1bQ9D0N7 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.09■□□□□ 0.01
Chaf1bQ9D0N7 Gm6190-201ENSMUST00000220683 1374 ntBASIC15.09■□□□□ 0.01
Chaf1bQ9D0N7 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chaf1bQ9D0N7 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Chaf1bQ9D0N7 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Chaf1bQ9D0N7 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC15.09■□□□□ 0.01
Chaf1bQ9D0N7 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.09■□□□□ 0.01
Chaf1bQ9D0N7 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Chaf1bQ9D0N7 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Chaf1bQ9D0N7 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Chaf1bQ9D0N7 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Chaf1bQ9D0N7 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Chaf1bQ9D0N7 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Chaf1bQ9D0N7 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Chaf1bQ9D0N7 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Chaf1bQ9D0N7 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Chaf1bQ9D0N7 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC15.08■□□□□ 0
Chaf1bQ9D0N7 AC135637.1-201ENSMUST00000227750 365 ntBASIC15.08■□□□□ 0
Chaf1bQ9D0N7 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Chaf1bQ9D0N7 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC15.08■□□□□ 0
Chaf1bQ9D0N7 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Chaf1bQ9D0N7 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.08■□□□□ 0
Chaf1bQ9D0N7 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Chaf1bQ9D0N7 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Chaf1bQ9D0N7 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.08■□□□□ 0
Chaf1bQ9D0N7 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Chaf1bQ9D0N7 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Chaf1bQ9D0N7 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Chaf1bQ9D0N7 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Chaf1bQ9D0N7 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Chaf1bQ9D0N7 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Chaf1bQ9D0N7 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.08■□□□□ 0
Chaf1bQ9D0N7 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Chaf1bQ9D0N7 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.08■□□□□ 0
Chaf1bQ9D0N7 AC154855.1-201ENSMUST00000227353 1458 ntBASIC15.08■□□□□ 0
Chaf1bQ9D0N7 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.07■□□□□ 0
Chaf1bQ9D0N7 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.07■□□□□ 0
Chaf1bQ9D0N7 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Chaf1bQ9D0N7 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Chaf1bQ9D0N7 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chaf1bQ9D0N7 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chaf1bQ9D0N7 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chaf1bQ9D0N7 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Chaf1bQ9D0N7 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Chaf1bQ9D0N7 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chaf1bQ9D0N7 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Chaf1bQ9D0N7 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Chaf1bQ9D0N7 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.07■□□□□ 0
Chaf1bQ9D0N7 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chaf1bQ9D0N7 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Chaf1bQ9D0N7 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Chaf1bQ9D0N7 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Chaf1bQ9D0N7 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Chaf1bQ9D0N7 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC15.07■□□□□ 0
Chaf1bQ9D0N7 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chaf1bQ9D0N7 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chaf1bQ9D0N7 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chaf1bQ9D0N7 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC15.07■□□□□ 0
Chaf1bQ9D0N7 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chaf1bQ9D0N7 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.07■□□□□ 0
Chaf1bQ9D0N7 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chaf1bQ9D0N7 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.07■□□□□ 0
Chaf1bQ9D0N7 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chaf1bQ9D0N7 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Chaf1bQ9D0N7 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.07■□□□□ 0
Chaf1bQ9D0N7 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chaf1bQ9D0N7 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.07■□□□□ 0
Chaf1bQ9D0N7 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.06■□□□□ 0
Chaf1bQ9D0N7 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chaf1bQ9D0N7 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.06■□□□□ 0
Chaf1bQ9D0N7 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.06■□□□□ 0
Chaf1bQ9D0N7 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.06■□□□□ 0
Chaf1bQ9D0N7 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Chaf1bQ9D0N7 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC15.06■□□□□ 0
Chaf1bQ9D0N7 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.06■□□□□ 0
Chaf1bQ9D0N7 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms