Protein–RNA interactions for Protein: Q9D0F1

Ndc80, Kinetochore protein NDC80 homolog, mousemouse

Known RBP Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc80Q9D0F1 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ndc80Q9D0F1 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ndc80Q9D0F1 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.3■□□□□ 0.2
Ndc80Q9D0F1 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ndc80Q9D0F1 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ndc80Q9D0F1 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ndc80Q9D0F1 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ndc80Q9D0F1 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ndc80Q9D0F1 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ndc80Q9D0F1 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ndc80Q9D0F1 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ndc80Q9D0F1 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ndc80Q9D0F1 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Ndc80Q9D0F1 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Ndc80Q9D0F1 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ndc80Q9D0F1 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Ndc80Q9D0F1 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ndc80Q9D0F1 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Ndc80Q9D0F1 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ndc80Q9D0F1 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ndc80Q9D0F1 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ndc80Q9D0F1 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.3■□□□□ 0.2
Ndc80Q9D0F1 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ndc80Q9D0F1 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ndc80Q9D0F1 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ndc80Q9D0F1 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ndc80Q9D0F1 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ndc80Q9D0F1 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ndc80Q9D0F1 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ndc80Q9D0F1 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ndc80Q9D0F1 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ndc80Q9D0F1 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ndc80Q9D0F1 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ndc80Q9D0F1 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Ndc80Q9D0F1 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ndc80Q9D0F1 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ndc80Q9D0F1 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ndc80Q9D0F1 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ndc80Q9D0F1 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ndc80Q9D0F1 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ndc80Q9D0F1 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.29■□□□□ 0.2
Ndc80Q9D0F1 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.29■□□□□ 0.2
Ndc80Q9D0F1 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ndc80Q9D0F1 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ndc80Q9D0F1 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ndc80Q9D0F1 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ndc80Q9D0F1 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ndc80Q9D0F1 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ndc80Q9D0F1 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ndc80Q9D0F1 Gm6345-202ENSMUST00000180900 204 ntBASIC16.29■□□□□ 0.2
Ndc80Q9D0F1 Gm36967-201ENSMUST00000193814 266 ntBASIC16.29■□□□□ 0.2
Ndc80Q9D0F1 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.29■□□□□ 0.2
Ndc80Q9D0F1 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ndc80Q9D0F1 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ndc80Q9D0F1 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ndc80Q9D0F1 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ndc80Q9D0F1 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ndc80Q9D0F1 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ndc80Q9D0F1 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ndc80Q9D0F1 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Ndc80Q9D0F1 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.29■□□□□ 0.2
Ndc80Q9D0F1 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.28■□□□□ 0.2
Ndc80Q9D0F1 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ndc80Q9D0F1 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.28■□□□□ 0.2
Ndc80Q9D0F1 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Ndc80Q9D0F1 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.28■□□□□ 0.2
Ndc80Q9D0F1 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ndc80Q9D0F1 Gm11950-201ENSMUST00000121615 838 ntBASIC16.28■□□□□ 0.2
Ndc80Q9D0F1 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Ndc80Q9D0F1 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ndc80Q9D0F1 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.28■□□□□ 0.2
Ndc80Q9D0F1 Gm17808-201ENSMUST00000200859 894 ntBASIC16.28■□□□□ 0.2
Ndc80Q9D0F1 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.28■□□□□ 0.2
Ndc80Q9D0F1 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ndc80Q9D0F1 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ndc80Q9D0F1 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ndc80Q9D0F1 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ndc80Q9D0F1 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ndc80Q9D0F1 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ndc80Q9D0F1 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ndc80Q9D0F1 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.28■□□□□ 0.2
Ndc80Q9D0F1 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ndc80Q9D0F1 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Ndc80Q9D0F1 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Ndc80Q9D0F1 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ndc80Q9D0F1 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ndc80Q9D0F1 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ndc80Q9D0F1 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ndc80Q9D0F1 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ndc80Q9D0F1 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ndc80Q9D0F1 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ndc80Q9D0F1 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ndc80Q9D0F1 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ndc80Q9D0F1 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ndc80Q9D0F1 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ndc80Q9D0F1 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ndc80Q9D0F1 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ndc80Q9D0F1 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ndc80Q9D0F1 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ndc80Q9D0F1 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms