Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cldnd1Q9CQX5 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cldnd1Q9CQX5 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC16.35■□□□□ 0.21
Cldnd1Q9CQX5 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cldnd1Q9CQX5 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cldnd1Q9CQX5 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cldnd1Q9CQX5 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cldnd1Q9CQX5 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Cldnd1Q9CQX5 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cldnd1Q9CQX5 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cldnd1Q9CQX5 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Cldnd1Q9CQX5 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.34■□□□□ 0.21
Cldnd1Q9CQX5 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Cldnd1Q9CQX5 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Cldnd1Q9CQX5 Gm11745-201ENSMUST00000121669 448 ntBASIC16.34■□□□□ 0.21
Cldnd1Q9CQX5 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cldnd1Q9CQX5 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cldnd1Q9CQX5 Gm25948-201ENSMUST00000175334 112 ntBASIC16.34■□□□□ 0.21
Cldnd1Q9CQX5 AC131187.1-201ENSMUST00000224567 809 ntBASIC16.34■□□□□ 0.21
Cldnd1Q9CQX5 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cldnd1Q9CQX5 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cldnd1Q9CQX5 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cldnd1Q9CQX5 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC16.34■□□□□ 0.21
Cldnd1Q9CQX5 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cldnd1Q9CQX5 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cldnd1Q9CQX5 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Cldnd1Q9CQX5 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cldnd1Q9CQX5 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.34■□□□□ 0.21
Cldnd1Q9CQX5 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cldnd1Q9CQX5 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cldnd1Q9CQX5 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cldnd1Q9CQX5 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cldnd1Q9CQX5 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cldnd1Q9CQX5 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC16.34■□□□□ 0.21
Cldnd1Q9CQX5 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cldnd1Q9CQX5 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cldnd1Q9CQX5 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cldnd1Q9CQX5 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cldnd1Q9CQX5 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Cldnd1Q9CQX5 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cldnd1Q9CQX5 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cldnd1Q9CQX5 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.33■□□□□ 0.21
Cldnd1Q9CQX5 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cldnd1Q9CQX5 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cldnd1Q9CQX5 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Cldnd1Q9CQX5 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC16.33■□□□□ 0.2
Cldnd1Q9CQX5 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC16.33■□□□□ 0.2
Cldnd1Q9CQX5 Gm5177-201ENSMUST00000183092 997 ntBASIC16.33■□□□□ 0.2
Cldnd1Q9CQX5 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC16.33■□□□□ 0.2
Cldnd1Q9CQX5 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC16.33■□□□□ 0.2
Cldnd1Q9CQX5 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
Cldnd1Q9CQX5 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cldnd1Q9CQX5 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Cldnd1Q9CQX5 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cldnd1Q9CQX5 Gm5366-201ENSMUST00000215494 1338 ntBASIC16.33■□□□□ 0.2
Cldnd1Q9CQX5 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cldnd1Q9CQX5 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.33■□□□□ 0.2
Cldnd1Q9CQX5 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cldnd1Q9CQX5 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cldnd1Q9CQX5 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cldnd1Q9CQX5 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.33■□□□□ 0.2
Cldnd1Q9CQX5 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Cldnd1Q9CQX5 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cldnd1Q9CQX5 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cldnd1Q9CQX5 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cldnd1Q9CQX5 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cldnd1Q9CQX5 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cldnd1Q9CQX5 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cldnd1Q9CQX5 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cldnd1Q9CQX5 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Cldnd1Q9CQX5 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cldnd1Q9CQX5 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Cldnd1Q9CQX5 Gm6226-201ENSMUST00000117765 1146 ntBASIC16.32■□□□□ 0.2
Cldnd1Q9CQX5 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cldnd1Q9CQX5 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cldnd1Q9CQX5 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cldnd1Q9CQX5 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cldnd1Q9CQX5 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cldnd1Q9CQX5 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.32■□□□□ 0.2
Cldnd1Q9CQX5 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cldnd1Q9CQX5 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cldnd1Q9CQX5 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cldnd1Q9CQX5 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Cldnd1Q9CQX5 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cldnd1Q9CQX5 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldnd1Q9CQX5 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldnd1Q9CQX5 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldnd1Q9CQX5 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Cldnd1Q9CQX5 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldnd1Q9CQX5 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldnd1Q9CQX5 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC16.31■□□□□ 0.2
Cldnd1Q9CQX5 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldnd1Q9CQX5 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldnd1Q9CQX5 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldnd1Q9CQX5 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cldnd1Q9CQX5 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC16.31■□□□□ 0.2
Cldnd1Q9CQX5 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC16.31■□□□□ 0.2
Cldnd1Q9CQX5 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cldnd1Q9CQX5 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC16.31■□□□□ 0.2
Cldnd1Q9CQX5 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms