Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.1■□□□□ 0.17
Retreg3Q9CQV4 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retreg3Q9CQV4 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Retreg3Q9CQV4 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retreg3Q9CQV4 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retreg3Q9CQV4 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.09■□□□□ 0.17
Retreg3Q9CQV4 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retreg3Q9CQV4 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Retreg3Q9CQV4 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Retreg3Q9CQV4 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retreg3Q9CQV4 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retreg3Q9CQV4 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retreg3Q9CQV4 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retreg3Q9CQV4 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retreg3Q9CQV4 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retreg3Q9CQV4 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retreg3Q9CQV4 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retreg3Q9CQV4 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Retreg3Q9CQV4 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
Retreg3Q9CQV4 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.09■□□□□ 0.17
Retreg3Q9CQV4 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.09■□□□□ 0.17
Retreg3Q9CQV4 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC16.09■□□□□ 0.17
Retreg3Q9CQV4 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.09■□□□□ 0.17
Retreg3Q9CQV4 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Retreg3Q9CQV4 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retreg3Q9CQV4 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retreg3Q9CQV4 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.09■□□□□ 0.17
Retreg3Q9CQV4 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Retreg3Q9CQV4 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Retreg3Q9CQV4 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.08■□□□□ 0.17
Retreg3Q9CQV4 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.08■□□□□ 0.17
Retreg3Q9CQV4 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retreg3Q9CQV4 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Retreg3Q9CQV4 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Retreg3Q9CQV4 Mir6404-201ENSMUST00000183699 94 ntBASIC16.08■□□□□ 0.16
Retreg3Q9CQV4 Gm36991-201ENSMUST00000191800 648 ntBASIC16.08■□□□□ 0.16
Retreg3Q9CQV4 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.08■□□□□ 0.16
Retreg3Q9CQV4 AC102523.2-201ENSMUST00000227813 983 ntBASIC16.08■□□□□ 0.16
Retreg3Q9CQV4 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Retreg3Q9CQV4 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retreg3Q9CQV4 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.08■□□□□ 0.16
Retreg3Q9CQV4 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Retreg3Q9CQV4 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Retreg3Q9CQV4 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retreg3Q9CQV4 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.08■□□□□ 0.16
Retreg3Q9CQV4 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.08■□□□□ 0.16
Retreg3Q9CQV4 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retreg3Q9CQV4 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retreg3Q9CQV4 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retreg3Q9CQV4 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retreg3Q9CQV4 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retreg3Q9CQV4 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retreg3Q9CQV4 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retreg3Q9CQV4 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.07■□□□□ 0.16
Retreg3Q9CQV4 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Retreg3Q9CQV4 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retreg3Q9CQV4 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retreg3Q9CQV4 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retreg3Q9CQV4 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Retreg3Q9CQV4 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retreg3Q9CQV4 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retreg3Q9CQV4 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retreg3Q9CQV4 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.07■□□□□ 0.16
Retreg3Q9CQV4 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.07■□□□□ 0.16
Retreg3Q9CQV4 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC16.07■□□□□ 0.16
Retreg3Q9CQV4 Birc2-201ENSMUST00000054878 378 ntBASIC16.07■□□□□ 0.16
Retreg3Q9CQV4 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retreg3Q9CQV4 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Retreg3Q9CQV4 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retreg3Q9CQV4 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retreg3Q9CQV4 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retreg3Q9CQV4 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Retreg3Q9CQV4 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retreg3Q9CQV4 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retreg3Q9CQV4 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retreg3Q9CQV4 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Retreg3Q9CQV4 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retreg3Q9CQV4 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Retreg3Q9CQV4 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retreg3Q9CQV4 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retreg3Q9CQV4 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retreg3Q9CQV4 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retreg3Q9CQV4 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retreg3Q9CQV4 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retreg3Q9CQV4 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retreg3Q9CQV4 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.07■□□□□ 0.16
Retreg3Q9CQV4 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Retreg3Q9CQV4 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Retreg3Q9CQV4 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retreg3Q9CQV4 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retreg3Q9CQV4 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retreg3Q9CQV4 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Retreg3Q9CQV4 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retreg3Q9CQV4 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retreg3Q9CQV4 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Retreg3Q9CQV4 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Retreg3Q9CQV4 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Retreg3Q9CQV4 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Retreg3Q9CQV4 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Retreg3Q9CQV4 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms