Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
H2afb1Q9CQ70 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
H2afb1Q9CQ70 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
H2afb1Q9CQ70 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
H2afb1Q9CQ70 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
H2afb1Q9CQ70 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
H2afb1Q9CQ70 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
H2afb1Q9CQ70 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
H2afb1Q9CQ70 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
H2afb1Q9CQ70 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
H2afb1Q9CQ70 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
H2afb1Q9CQ70 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
H2afb1Q9CQ70 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
H2afb1Q9CQ70 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
H2afb1Q9CQ70 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
H2afb1Q9CQ70 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
H2afb1Q9CQ70 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
H2afb1Q9CQ70 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
H2afb1Q9CQ70 AC132265.1-201ENSMUST00000219233 1665 ntBASIC13.12□□□□□ -0.31
H2afb1Q9CQ70 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.12□□□□□ -0.31
H2afb1Q9CQ70 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
H2afb1Q9CQ70 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
H2afb1Q9CQ70 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H2afb1Q9CQ70 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H2afb1Q9CQ70 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H2afb1Q9CQ70 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
H2afb1Q9CQ70 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
H2afb1Q9CQ70 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.11□□□□□ -0.31
H2afb1Q9CQ70 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H2afb1Q9CQ70 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
H2afb1Q9CQ70 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H2afb1Q9CQ70 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
H2afb1Q9CQ70 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
H2afb1Q9CQ70 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H2afb1Q9CQ70 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
H2afb1Q9CQ70 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC13.11□□□□□ -0.31
H2afb1Q9CQ70 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
H2afb1Q9CQ70 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
H2afb1Q9CQ70 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC13.11□□□□□ -0.31
H2afb1Q9CQ70 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
H2afb1Q9CQ70 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
H2afb1Q9CQ70 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H2afb1Q9CQ70 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H2afb1Q9CQ70 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
H2afb1Q9CQ70 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
H2afb1Q9CQ70 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
H2afb1Q9CQ70 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H2afb1Q9CQ70 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
H2afb1Q9CQ70 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H2afb1Q9CQ70 Gm6858-201ENSMUST00000208582 1468 ntBASIC13.1□□□□□ -0.31
H2afb1Q9CQ70 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H2afb1Q9CQ70 CT010478.1-201ENSMUST00000220747 2787 ntBASIC13.1□□□□□ -0.31
H2afb1Q9CQ70 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H2afb1Q9CQ70 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H2afb1Q9CQ70 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H2afb1Q9CQ70 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
H2afb1Q9CQ70 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC13.1□□□□□ -0.31
H2afb1Q9CQ70 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H2afb1Q9CQ70 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H2afb1Q9CQ70 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H2afb1Q9CQ70 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
H2afb1Q9CQ70 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC13.1□□□□□ -0.31
H2afb1Q9CQ70 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC13.1□□□□□ -0.31
H2afb1Q9CQ70 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
H2afb1Q9CQ70 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H2afb1Q9CQ70 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC13.1□□□□□ -0.31
H2afb1Q9CQ70 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC13.1□□□□□ -0.31
H2afb1Q9CQ70 Mir6982-201ENSMUST00000184354 68 ntBASIC13.1□□□□□ -0.31
H2afb1Q9CQ70 Gm10252-201ENSMUST00000209541 832 ntBASIC13.1□□□□□ -0.31
H2afb1Q9CQ70 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
H2afb1Q9CQ70 Gm18032-201ENSMUST00000222541 538 ntBASIC13.1□□□□□ -0.31
H2afb1Q9CQ70 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H2afb1Q9CQ70 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H2afb1Q9CQ70 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
H2afb1Q9CQ70 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H2afb1Q9CQ70 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
H2afb1Q9CQ70 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H2afb1Q9CQ70 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
H2afb1Q9CQ70 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H2afb1Q9CQ70 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H2afb1Q9CQ70 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H2afb1Q9CQ70 Prob1-201ENSMUST00000097619 3021 ntBASIC13.1□□□□□ -0.31
H2afb1Q9CQ70 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H2afb1Q9CQ70 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H2afb1Q9CQ70 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H2afb1Q9CQ70 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H2afb1Q9CQ70 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H2afb1Q9CQ70 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC13.09□□□□□ -0.31
H2afb1Q9CQ70 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
H2afb1Q9CQ70 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H2afb1Q9CQ70 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
H2afb1Q9CQ70 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H2afb1Q9CQ70 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
H2afb1Q9CQ70 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
H2afb1Q9CQ70 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC13.09□□□□□ -0.31
H2afb1Q9CQ70 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
H2afb1Q9CQ70 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H2afb1Q9CQ70 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
H2afb1Q9CQ70 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
H2afb1Q9CQ70 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms