Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf8Q99PV0 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf8Q99PV0 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf8Q99PV0 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf8Q99PV0 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf8Q99PV0 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf8Q99PV0 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf8Q99PV0 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf8Q99PV0 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf8Q99PV0 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf8Q99PV0 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf8Q99PV0 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC13.1□□□□□ -0.31
Prpf8Q99PV0 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC13.1□□□□□ -0.31
Prpf8Q99PV0 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf8Q99PV0 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf8Q99PV0 Gm10576-201ENSMUST00000191927 825 ntBASIC13.1□□□□□ -0.31
Prpf8Q99PV0 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf8Q99PV0 AC154222.1-201ENSMUST00000223882 475 ntBASIC13.1□□□□□ -0.31
Prpf8Q99PV0 AC127349.1-201ENSMUST00000224590 266 ntBASIC13.1□□□□□ -0.31
Prpf8Q99PV0 Gm10175-201ENSMUST00000086013 645 ntBASIC13.1□□□□□ -0.31
Prpf8Q99PV0 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC13.09□□□□□ -0.31
Prpf8Q99PV0 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf8Q99PV0 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf8Q99PV0 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf8Q99PV0 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf8Q99PV0 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf8Q99PV0 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.09□□□□□ -0.31
Prpf8Q99PV0 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf8Q99PV0 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf8Q99PV0 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf8Q99PV0 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Prpf8Q99PV0 Gm13418-201ENSMUST00000119097 944 ntBASIC13.09□□□□□ -0.31
Prpf8Q99PV0 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf8Q99PV0 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Prpf8Q99PV0 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf8Q99PV0 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Prpf8Q99PV0 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf8Q99PV0 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf8Q99PV0 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
Prpf8Q99PV0 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf8Q99PV0 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf8Q99PV0 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf8Q99PV0 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf8Q99PV0 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf8Q99PV0 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf8Q99PV0 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
Prpf8Q99PV0 Gm11764-201ENSMUST00000120221 623 ntBASIC13.08□□□□□ -0.31
Prpf8Q99PV0 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC13.08□□□□□ -0.31
Prpf8Q99PV0 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC13.08□□□□□ -0.31
Prpf8Q99PV0 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Prpf8Q99PV0 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC13.08□□□□□ -0.31
Prpf8Q99PV0 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC13.08□□□□□ -0.31
Prpf8Q99PV0 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Prpf8Q99PV0 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
Prpf8Q99PV0 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.31
Prpf8Q99PV0 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Prpf8Q99PV0 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Prpf8Q99PV0 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf8Q99PV0 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Prpf8Q99PV0 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf8Q99PV0 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf8Q99PV0 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf8Q99PV0 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf8Q99PV0 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf8Q99PV0 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf8Q99PV0 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf8Q99PV0 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf8Q99PV0 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf8Q99PV0 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Prpf8Q99PV0 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf8Q99PV0 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf8Q99PV0 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Prpf8Q99PV0 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf8Q99PV0 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf8Q99PV0 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Prpf8Q99PV0 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC13.07□□□□□ -0.32
Prpf8Q99PV0 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC13.07□□□□□ -0.32
Prpf8Q99PV0 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Prpf8Q99PV0 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Prpf8Q99PV0 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Prpf8Q99PV0 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Prpf8Q99PV0 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Prpf8Q99PV0 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC13.07□□□□□ -0.32
Prpf8Q99PV0 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Prpf8Q99PV0 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Prpf8Q99PV0 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Prpf8Q99PV0 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Prpf8Q99PV0 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Prpf8Q99PV0 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Prpf8Q99PV0 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Prpf8Q99PV0 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Prpf8Q99PV0 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Prpf8Q99PV0 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Prpf8Q99PV0 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC13.07□□□□□ -0.32
Prpf8Q99PV0 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC13.07□□□□□ -0.32
Prpf8Q99PV0 Gm5648-201ENSMUST00000122244 1587 ntBASIC13.07□□□□□ -0.32
Prpf8Q99PV0 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Prpf8Q99PV0 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC13.07□□□□□ -0.32
Prpf8Q99PV0 Gm24513-201ENSMUST00000174964 138 ntBASIC13.07□□□□□ -0.32
Prpf8Q99PV0 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms