Protein–RNA interactions for Protein: Q99PI8

Rtn4r, Reticulon-4 receptor, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rQ99PI8 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rtn4rQ99PI8 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rtn4rQ99PI8 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Rtn4rQ99PI8 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rtn4rQ99PI8 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Rtn4rQ99PI8 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rtn4rQ99PI8 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rtn4rQ99PI8 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rtn4rQ99PI8 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rtn4rQ99PI8 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Rtn4rQ99PI8 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Rtn4rQ99PI8 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Rtn4rQ99PI8 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Rtn4rQ99PI8 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rtn4rQ99PI8 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rtn4rQ99PI8 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.13□□□□□ -0.15
Rtn4rQ99PI8 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rtn4rQ99PI8 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.13□□□□□ -0.15
Rtn4rQ99PI8 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rtn4rQ99PI8 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rtn4rQ99PI8 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rtn4rQ99PI8 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.13□□□□□ -0.15
Rtn4rQ99PI8 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rtn4rQ99PI8 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rtn4rQ99PI8 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rtn4rQ99PI8 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rtn4rQ99PI8 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.12□□□□□ -0.15
Rtn4rQ99PI8 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rtn4rQ99PI8 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rtn4rQ99PI8 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rtn4rQ99PI8 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rtn4rQ99PI8 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rtn4rQ99PI8 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rtn4rQ99PI8 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rtn4rQ99PI8 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rtn4rQ99PI8 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rtn4rQ99PI8 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rtn4rQ99PI8 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rtn4rQ99PI8 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rtn4rQ99PI8 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.12□□□□□ -0.15
Rtn4rQ99PI8 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.12□□□□□ -0.15
Rtn4rQ99PI8 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.12□□□□□ -0.15
Rtn4rQ99PI8 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rtn4rQ99PI8 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rtn4rQ99PI8 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rtn4rQ99PI8 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rtn4rQ99PI8 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rtn4rQ99PI8 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rtn4rQ99PI8 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.11□□□□□ -0.15
Rtn4rQ99PI8 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Rtn4rQ99PI8 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rtn4rQ99PI8 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rtn4rQ99PI8 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rtn4rQ99PI8 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Rtn4rQ99PI8 Gm34391-201ENSMUST00000203706 907 ntBASIC14.11□□□□□ -0.15
Rtn4rQ99PI8 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.11□□□□□ -0.15
Rtn4rQ99PI8 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rtn4rQ99PI8 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rtn4rQ99PI8 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rtn4rQ99PI8 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rtn4rQ99PI8 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rtn4rQ99PI8 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rtn4rQ99PI8 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.11□□□□□ -0.15
Rtn4rQ99PI8 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Rtn4rQ99PI8 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rtn4rQ99PI8 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rtn4rQ99PI8 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.11□□□□□ -0.15
Rtn4rQ99PI8 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rtn4rQ99PI8 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rtn4rQ99PI8 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rtn4rQ99PI8 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rtn4rQ99PI8 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rtn4rQ99PI8 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Rtn4rQ99PI8 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rtn4rQ99PI8 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rtn4rQ99PI8 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rtn4rQ99PI8 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rtn4rQ99PI8 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rtn4rQ99PI8 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rtn4rQ99PI8 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.1□□□□□ -0.15
Rtn4rQ99PI8 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rtn4rQ99PI8 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rtn4rQ99PI8 Rprl3-201ENSMUST00000157400 290 ntBASIC14.1□□□□□ -0.15
Rtn4rQ99PI8 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rtn4rQ99PI8 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.1□□□□□ -0.15
Rtn4rQ99PI8 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rtn4rQ99PI8 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rtn4rQ99PI8 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rtn4rQ99PI8 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Rtn4rQ99PI8 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rtn4rQ99PI8 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Rtn4rQ99PI8 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rtn4rQ99PI8 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rtn4rQ99PI8 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.1□□□□□ -0.15
Rtn4rQ99PI8 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rtn4rQ99PI8 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rtn4rQ99PI8 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rtn4rQ99PI8 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Rtn4rQ99PI8 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rtn4rQ99PI8 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms