Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rfc4Q99J62 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rfc4Q99J62 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC18.4■□□□□ 0.54
Rfc4Q99J62 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rfc4Q99J62 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC18.4■□□□□ 0.54
Rfc4Q99J62 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC18.4■□□□□ 0.54
Rfc4Q99J62 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rfc4Q99J62 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Rfc4Q99J62 Gm5682-201ENSMUST00000173402 505 ntBASIC18.4■□□□□ 0.54
Rfc4Q99J62 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC18.4■□□□□ 0.54
Rfc4Q99J62 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rfc4Q99J62 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rfc4Q99J62 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rfc4Q99J62 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rfc4Q99J62 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC18.4■□□□□ 0.54
Rfc4Q99J62 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rfc4Q99J62 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rfc4Q99J62 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Rfc4Q99J62 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rfc4Q99J62 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC18.39■□□□□ 0.53
Rfc4Q99J62 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC18.39■□□□□ 0.53
Rfc4Q99J62 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rfc4Q99J62 Gm7063-201ENSMUST00000186840 981 ntBASIC18.39■□□□□ 0.53
Rfc4Q99J62 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rfc4Q99J62 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC18.39■□□□□ 0.53
Rfc4Q99J62 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
Rfc4Q99J62 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rfc4Q99J62 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rfc4Q99J62 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rfc4Q99J62 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC18.39■□□□□ 0.53
Rfc4Q99J62 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Rfc4Q99J62 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rfc4Q99J62 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rfc4Q99J62 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rfc4Q99J62 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rfc4Q99J62 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC18.39■□□□□ 0.53
Rfc4Q99J62 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rfc4Q99J62 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.39■□□□□ 0.53
Rfc4Q99J62 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC18.38■□□□□ 0.53
Rfc4Q99J62 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rfc4Q99J62 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rfc4Q99J62 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rfc4Q99J62 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rfc4Q99J62 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Rfc4Q99J62 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rfc4Q99J62 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC18.38■□□□□ 0.53
Rfc4Q99J62 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rfc4Q99J62 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rfc4Q99J62 Gm5253-201ENSMUST00000187104 1025 ntBASIC18.38■□□□□ 0.53
Rfc4Q99J62 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC18.38■□□□□ 0.53
Rfc4Q99J62 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC18.38■□□□□ 0.53
Rfc4Q99J62 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
Rfc4Q99J62 AC131709.1-201ENSMUST00000224731 1180 ntBASIC18.38■□□□□ 0.53
Rfc4Q99J62 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rfc4Q99J62 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rfc4Q99J62 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rfc4Q99J62 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rfc4Q99J62 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rfc4Q99J62 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rfc4Q99J62 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rfc4Q99J62 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rfc4Q99J62 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Rfc4Q99J62 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rfc4Q99J62 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rfc4Q99J62 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rfc4Q99J62 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rfc4Q99J62 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC18.37■□□□□ 0.53
Rfc4Q99J62 Auts2-212ENSMUST00000178555 309 ntBASIC18.37■□□□□ 0.53
Rfc4Q99J62 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC18.37■□□□□ 0.53
Rfc4Q99J62 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Rfc4Q99J62 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rfc4Q99J62 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rfc4Q99J62 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rfc4Q99J62 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC18.37■□□□□ 0.53
Rfc4Q99J62 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rfc4Q99J62 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rfc4Q99J62 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rfc4Q99J62 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Rfc4Q99J62 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rfc4Q99J62 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rfc4Q99J62 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rfc4Q99J62 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Rfc4Q99J62 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rfc4Q99J62 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rfc4Q99J62 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC18.36■□□□□ 0.53
Rfc4Q99J62 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.36■□□□□ 0.53
Rfc4Q99J62 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC18.36■□□□□ 0.53
Rfc4Q99J62 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rfc4Q99J62 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rfc4Q99J62 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rfc4Q99J62 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC18.36■□□□□ 0.53
Rfc4Q99J62 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rfc4Q99J62 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rfc4Q99J62 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rfc4Q99J62 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rfc4Q99J62 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rfc4Q99J62 Gm15500-202ENSMUST00000071641 1019 ntBASIC18.36■□□□□ 0.53
Rfc4Q99J62 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rfc4Q99J62 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rfc4Q99J62 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms