Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdha11Q91Y19 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Pcdha11Q91Y19 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdha11Q91Y19 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdha11Q91Y19 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdha11Q91Y19 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Pcdha11Q91Y19 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdha11Q91Y19 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Pcdha11Q91Y19 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Pcdha11Q91Y19 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdha11Q91Y19 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdha11Q91Y19 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC16.8■□□□□ 0.28
Pcdha11Q91Y19 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdha11Q91Y19 Gm9172-201ENSMUST00000212092 954 ntBASIC16.8■□□□□ 0.28
Pcdha11Q91Y19 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.8■□□□□ 0.28
Pcdha11Q91Y19 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdha11Q91Y19 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdha11Q91Y19 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdha11Q91Y19 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdha11Q91Y19 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Pcdha11Q91Y19 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdha11Q91Y19 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdha11Q91Y19 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Pcdha11Q91Y19 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdha11Q91Y19 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdha11Q91Y19 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Pcdha11Q91Y19 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdha11Q91Y19 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdha11Q91Y19 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Pcdha11Q91Y19 Gm11452-201ENSMUST00000122376 690 ntBASIC16.79■□□□□ 0.28
Pcdha11Q91Y19 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdha11Q91Y19 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdha11Q91Y19 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdha11Q91Y19 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdha11Q91Y19 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdha11Q91Y19 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdha11Q91Y19 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdha11Q91Y19 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdha11Q91Y19 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.78■□□□□ 0.28
Pcdha11Q91Y19 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdha11Q91Y19 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.78■□□□□ 0.28
Pcdha11Q91Y19 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdha11Q91Y19 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdha11Q91Y19 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdha11Q91Y19 Gm13884-201ENSMUST00000118103 829 ntBASIC16.78■□□□□ 0.28
Pcdha11Q91Y19 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.78■□□□□ 0.28
Pcdha11Q91Y19 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdha11Q91Y19 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Pcdha11Q91Y19 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Pcdha11Q91Y19 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdha11Q91Y19 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdha11Q91Y19 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdha11Q91Y19 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
Pcdha11Q91Y19 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdha11Q91Y19 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.78■□□□□ 0.28
Pcdha11Q91Y19 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdha11Q91Y19 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdha11Q91Y19 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdha11Q91Y19 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdha11Q91Y19 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.77■□□□□ 0.28
Pcdha11Q91Y19 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdha11Q91Y19 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdha11Q91Y19 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Pcdha11Q91Y19 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdha11Q91Y19 Gm12497-201ENSMUST00000138778 237 ntBASIC16.77■□□□□ 0.28
Pcdha11Q91Y19 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.77■□□□□ 0.28
Pcdha11Q91Y19 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.77■□□□□ 0.28
Pcdha11Q91Y19 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.77■□□□□ 0.28
Pcdha11Q91Y19 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdha11Q91Y19 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdha11Q91Y19 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdha11Q91Y19 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdha11Q91Y19 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdha11Q91Y19 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdha11Q91Y19 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.77■□□□□ 0.27
Pcdha11Q91Y19 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdha11Q91Y19 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdha11Q91Y19 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdha11Q91Y19 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdha11Q91Y19 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdha11Q91Y19 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdha11Q91Y19 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdha11Q91Y19 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.76■□□□□ 0.27
Pcdha11Q91Y19 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Pcdha11Q91Y19 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdha11Q91Y19 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.76■□□□□ 0.27
Pcdha11Q91Y19 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdha11Q91Y19 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
Pcdha11Q91Y19 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Pcdha11Q91Y19 Gm4459-201ENSMUST00000118750 468 ntBASIC16.76■□□□□ 0.27
Pcdha11Q91Y19 Rps4l-201ENSMUST00000071745 943 ntBASIC16.76■□□□□ 0.27
Pcdha11Q91Y19 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdha11Q91Y19 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdha11Q91Y19 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdha11Q91Y19 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdha11Q91Y19 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdha11Q91Y19 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
Pcdha11Q91Y19 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Pcdha11Q91Y19 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdha11Q91Y19 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms