Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb3Q91XZ7 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb3Q91XZ7 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb3Q91XZ7 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb3Q91XZ7 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb3Q91XZ7 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Pcdhb3Q91XZ7 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb3Q91XZ7 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb3Q91XZ7 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Pcdhb3Q91XZ7 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb3Q91XZ7 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Pcdhb3Q91XZ7 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.04■□□□□ 0.16
Pcdhb3Q91XZ7 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb3Q91XZ7 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb3Q91XZ7 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb3Q91XZ7 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Pcdhb3Q91XZ7 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb3Q91XZ7 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.04■□□□□ 0.16
Pcdhb3Q91XZ7 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb3Q91XZ7 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb3Q91XZ7 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb3Q91XZ7 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb3Q91XZ7 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb3Q91XZ7 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb3Q91XZ7 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb3Q91XZ7 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb3Q91XZ7 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb3Q91XZ7 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb3Q91XZ7 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb3Q91XZ7 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb3Q91XZ7 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb3Q91XZ7 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb3Q91XZ7 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb3Q91XZ7 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.03■□□□□ 0.16
Pcdhb3Q91XZ7 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb3Q91XZ7 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb3Q91XZ7 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Pcdhb3Q91XZ7 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb3Q91XZ7 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb3Q91XZ7 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC16.03■□□□□ 0.16
Pcdhb3Q91XZ7 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb3Q91XZ7 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb3Q91XZ7 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb3Q91XZ7 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.03■□□□□ 0.16
Pcdhb3Q91XZ7 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Pcdhb3Q91XZ7 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC16.03■□□□□ 0.16
Pcdhb3Q91XZ7 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC16.03■□□□□ 0.16
Pcdhb3Q91XZ7 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdhb3Q91XZ7 Gm16425-201ENSMUST00000118143 3130 ntBASIC16.03■□□□□ 0.16
Pcdhb3Q91XZ7 Gm10710-201ENSMUST00000047876 3971 ntBASIC16.02■□□□□ 0.16
Pcdhb3Q91XZ7 Gm37305-201ENSMUST00000195714 4279 ntBASIC16.02■□□□□ 0.16
Pcdhb3Q91XZ7 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb3Q91XZ7 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
Pcdhb3Q91XZ7 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb3Q91XZ7 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb3Q91XZ7 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb3Q91XZ7 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb3Q91XZ7 Gm9768-201ENSMUST00000206007 2861 ntBASIC16.02■□□□□ 0.16
Pcdhb3Q91XZ7 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Pcdhb3Q91XZ7 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb3Q91XZ7 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb3Q91XZ7 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb3Q91XZ7 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb3Q91XZ7 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb3Q91XZ7 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb3Q91XZ7 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb3Q91XZ7 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb3Q91XZ7 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
Pcdhb3Q91XZ7 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb3Q91XZ7 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.02■□□□□ 0.16
Pcdhb3Q91XZ7 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.02■□□□□ 0.16
Pcdhb3Q91XZ7 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb3Q91XZ7 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pcdhb3Q91XZ7 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhb3Q91XZ7 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC16.02■□□□□ 0.15
Pcdhb3Q91XZ7 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.02■□□□□ 0.15
Pcdhb3Q91XZ7 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhb3Q91XZ7 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhb3Q91XZ7 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.02■□□□□ 0.15
Pcdhb3Q91XZ7 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC16.02■□□□□ 0.15
Pcdhb3Q91XZ7 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pcdhb3Q91XZ7 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb3Q91XZ7 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb3Q91XZ7 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb3Q91XZ7 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb3Q91XZ7 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb3Q91XZ7 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb3Q91XZ7 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb3Q91XZ7 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.01■□□□□ 0.15
Pcdhb3Q91XZ7 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb3Q91XZ7 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb3Q91XZ7 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Pcdhb3Q91XZ7 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb3Q91XZ7 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb3Q91XZ7 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb3Q91XZ7 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Pcdhb3Q91XZ7 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
Pcdhb3Q91XZ7 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.01■□□□□ 0.15
Pcdhb3Q91XZ7 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pcdhb3Q91XZ7 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms