Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgc3Q91XX1 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgc3Q91XX1 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgc3Q91XX1 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgc3Q91XX1 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgc3Q91XX1 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgc3Q91XX1 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Pcdhgc3Q91XX1 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.17■□□□□ 0.02
Pcdhgc3Q91XX1 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgc3Q91XX1 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgc3Q91XX1 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgc3Q91XX1 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgc3Q91XX1 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgc3Q91XX1 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgc3Q91XX1 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhgc3Q91XX1 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhgc3Q91XX1 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhgc3Q91XX1 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.16■□□□□ 0.02
Pcdhgc3Q91XX1 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Pcdhgc3Q91XX1 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhgc3Q91XX1 AC124581.1-201ENSMUST00000225416 1399 ntBASIC15.16■□□□□ 0.02
Pcdhgc3Q91XX1 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhgc3Q91XX1 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhgc3Q91XX1 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC15.16■□□□□ 0.02
Pcdhgc3Q91XX1 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
Pcdhgc3Q91XX1 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhgc3Q91XX1 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhgc3Q91XX1 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhgc3Q91XX1 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhgc3Q91XX1 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhgc3Q91XX1 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15.16■□□□□ 0.02
Pcdhgc3Q91XX1 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhgc3Q91XX1 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhgc3Q91XX1 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.16■□□□□ 0.02
Pcdhgc3Q91XX1 BC037039-201ENSMUST00000192003 2205 ntBASIC15.16■□□□□ 0.02
Pcdhgc3Q91XX1 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhgc3Q91XX1 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhgc3Q91XX1 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.16■□□□□ 0.02
Pcdhgc3Q91XX1 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhgc3Q91XX1 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.15■□□□□ 0.02
Pcdhgc3Q91XX1 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhgc3Q91XX1 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
Pcdhgc3Q91XX1 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhgc3Q91XX1 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhgc3Q91XX1 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhgc3Q91XX1 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhgc3Q91XX1 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhgc3Q91XX1 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhgc3Q91XX1 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhgc3Q91XX1 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhgc3Q91XX1 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC15.15■□□□□ 0.02
Pcdhgc3Q91XX1 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhgc3Q91XX1 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhgc3Q91XX1 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhgc3Q91XX1 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhgc3Q91XX1 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhgc3Q91XX1 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhgc3Q91XX1 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhgc3Q91XX1 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhgc3Q91XX1 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.15■□□□□ 0.02
Pcdhgc3Q91XX1 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhgc3Q91XX1 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.15■□□□□ 0.02
Pcdhgc3Q91XX1 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhgc3Q91XX1 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhgc3Q91XX1 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhgc3Q91XX1 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhgc3Q91XX1 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhgc3Q91XX1 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.14■□□□□ 0.01
Pcdhgc3Q91XX1 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhgc3Q91XX1 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhgc3Q91XX1 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhgc3Q91XX1 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhgc3Q91XX1 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhgc3Q91XX1 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhgc3Q91XX1 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhgc3Q91XX1 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhgc3Q91XX1 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Pcdhgc3Q91XX1 Actl10-202ENSMUST00000226583 1501 ntBASIC15.14■□□□□ 0.01
Pcdhgc3Q91XX1 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Pcdhgc3Q91XX1 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Pcdhgc3Q91XX1 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhgc3Q91XX1 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Pcdhgc3Q91XX1 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC15.14■□□□□ 0.01
Pcdhgc3Q91XX1 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC15.14■□□□□ 0.01
Pcdhgc3Q91XX1 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhgc3Q91XX1 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC15.14■□□□□ 0.01
Pcdhgc3Q91XX1 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhgc3Q91XX1 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC15.14■□□□□ 0.01
Pcdhgc3Q91XX1 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhgc3Q91XX1 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Pcdhgc3Q91XX1 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhgc3Q91XX1 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhgc3Q91XX1 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.14■□□□□ 0.01
Pcdhgc3Q91XX1 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhgc3Q91XX1 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
Pcdhgc3Q91XX1 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhgc3Q91XX1 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhgc3Q91XX1 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhgc3Q91XX1 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Pcdhgc3Q91XX1 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms