Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
H1fooQ8VIK3 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
H1fooQ8VIK3 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
H1fooQ8VIK3 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
H1fooQ8VIK3 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
H1fooQ8VIK3 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
H1fooQ8VIK3 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
H1fooQ8VIK3 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
H1fooQ8VIK3 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC13.44□□□□□ -0.26
H1fooQ8VIK3 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
H1fooQ8VIK3 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
H1fooQ8VIK3 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
H1fooQ8VIK3 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
H1fooQ8VIK3 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
H1fooQ8VIK3 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
H1fooQ8VIK3 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
H1fooQ8VIK3 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
H1fooQ8VIK3 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
H1fooQ8VIK3 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
H1fooQ8VIK3 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
H1fooQ8VIK3 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
H1fooQ8VIK3 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
H1fooQ8VIK3 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
H1fooQ8VIK3 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
H1fooQ8VIK3 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
H1fooQ8VIK3 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
H1fooQ8VIK3 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
H1fooQ8VIK3 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
H1fooQ8VIK3 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
H1fooQ8VIK3 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
H1fooQ8VIK3 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC13.43□□□□□ -0.26
H1fooQ8VIK3 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
H1fooQ8VIK3 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
H1fooQ8VIK3 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
H1fooQ8VIK3 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
H1fooQ8VIK3 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
H1fooQ8VIK3 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
H1fooQ8VIK3 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
H1fooQ8VIK3 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
H1fooQ8VIK3 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
H1fooQ8VIK3 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
H1fooQ8VIK3 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
H1fooQ8VIK3 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
H1fooQ8VIK3 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
H1fooQ8VIK3 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
H1fooQ8VIK3 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
H1fooQ8VIK3 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
H1fooQ8VIK3 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
H1fooQ8VIK3 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
H1fooQ8VIK3 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
H1fooQ8VIK3 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
H1fooQ8VIK3 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
H1fooQ8VIK3 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
H1fooQ8VIK3 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
H1fooQ8VIK3 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
H1fooQ8VIK3 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
H1fooQ8VIK3 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.42□□□□□ -0.26
H1fooQ8VIK3 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
H1fooQ8VIK3 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
H1fooQ8VIK3 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
H1fooQ8VIK3 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC13.42□□□□□ -0.26
H1fooQ8VIK3 Gm11860-201ENSMUST00000122346 1010 ntBASIC13.42□□□□□ -0.26
H1fooQ8VIK3 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC13.42□□□□□ -0.26
H1fooQ8VIK3 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
H1fooQ8VIK3 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC13.42□□□□□ -0.26
H1fooQ8VIK3 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
H1fooQ8VIK3 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
H1fooQ8VIK3 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC13.42□□□□□ -0.26
H1fooQ8VIK3 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
H1fooQ8VIK3 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
H1fooQ8VIK3 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
H1fooQ8VIK3 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
H1fooQ8VIK3 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
H1fooQ8VIK3 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
H1fooQ8VIK3 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
H1fooQ8VIK3 CT010478.1-201ENSMUST00000220747 2787 ntBASIC13.42□□□□□ -0.26
H1fooQ8VIK3 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
H1fooQ8VIK3 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
H1fooQ8VIK3 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
H1fooQ8VIK3 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
H1fooQ8VIK3 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
H1fooQ8VIK3 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
H1fooQ8VIK3 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
H1fooQ8VIK3 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
H1fooQ8VIK3 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
H1fooQ8VIK3 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
H1fooQ8VIK3 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
H1fooQ8VIK3 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
H1fooQ8VIK3 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.41□□□□□ -0.26
H1fooQ8VIK3 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
H1fooQ8VIK3 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
H1fooQ8VIK3 Gm10052-201ENSMUST00000168019 960 ntBASIC13.41□□□□□ -0.26
H1fooQ8VIK3 Gm10231-201ENSMUST00000181584 441 ntBASIC13.41□□□□□ -0.26
H1fooQ8VIK3 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
H1fooQ8VIK3 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
H1fooQ8VIK3 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.41□□□□□ -0.26
H1fooQ8VIK3 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
H1fooQ8VIK3 Gm10175-202ENSMUST00000208752 441 ntBASIC13.41□□□□□ -0.26
H1fooQ8VIK3 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC13.41□□□□□ -0.26
H1fooQ8VIK3 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms