Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh18Q8VHR0 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC15.46■□□□□ 0.07
Pcdh18Q8VHR0 Gm715-201ENSMUST00000117865 831 ntBASIC15.46■□□□□ 0.07
Pcdh18Q8VHR0 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC15.46■□□□□ 0.07
Pcdh18Q8VHR0 Gm18958-201ENSMUST00000174258 762 ntBASIC15.46■□□□□ 0.07
Pcdh18Q8VHR0 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC15.46■□□□□ 0.07
Pcdh18Q8VHR0 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh18Q8VHR0 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh18Q8VHR0 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh18Q8VHR0 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
Pcdh18Q8VHR0 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Pcdh18Q8VHR0 Gm10812-201ENSMUST00000099864 546 ntBASIC15.46■□□□□ 0.07
Pcdh18Q8VHR0 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh18Q8VHR0 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.46■□□□□ 0.07
Pcdh18Q8VHR0 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh18Q8VHR0 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh18Q8VHR0 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh18Q8VHR0 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh18Q8VHR0 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh18Q8VHR0 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Pcdh18Q8VHR0 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh18Q8VHR0 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh18Q8VHR0 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.46■□□□□ 0.07
Pcdh18Q8VHR0 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh18Q8VHR0 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh18Q8VHR0 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh18Q8VHR0 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Pcdh18Q8VHR0 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdh18Q8VHR0 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdh18Q8VHR0 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdh18Q8VHR0 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.06
Pcdh18Q8VHR0 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdh18Q8VHR0 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh18Q8VHR0 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh18Q8VHR0 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh18Q8VHR0 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh18Q8VHR0 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh18Q8VHR0 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC15.45■□□□□ 0.06
Pcdh18Q8VHR0 AC159649.2-201ENSMUST00000222984 3223 ntBASIC15.45■□□□□ 0.06
Pcdh18Q8VHR0 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC15.45■□□□□ 0.06
Pcdh18Q8VHR0 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh18Q8VHR0 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh18Q8VHR0 Gm27000-201ENSMUST00000182943 842 ntBASIC15.45■□□□□ 0.06
Pcdh18Q8VHR0 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC15.45■□□□□ 0.06
Pcdh18Q8VHR0 Arhgef33-211ENSMUST00000225658 473 ntBASIC15.45■□□□□ 0.06
Pcdh18Q8VHR0 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh18Q8VHR0 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh18Q8VHR0 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh18Q8VHR0 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Pcdh18Q8VHR0 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh18Q8VHR0 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh18Q8VHR0 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh18Q8VHR0 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh18Q8VHR0 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh18Q8VHR0 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh18Q8VHR0 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh18Q8VHR0 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC15.45■□□□□ 0.06
Pcdh18Q8VHR0 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh18Q8VHR0 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh18Q8VHR0 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh18Q8VHR0 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.45■□□□□ 0.06
Pcdh18Q8VHR0 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh18Q8VHR0 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh18Q8VHR0 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Pcdh18Q8VHR0 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh18Q8VHR0 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh18Q8VHR0 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.44■□□□□ 0.06
Pcdh18Q8VHR0 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh18Q8VHR0 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh18Q8VHR0 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Pcdh18Q8VHR0 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh18Q8VHR0 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh18Q8VHR0 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh18Q8VHR0 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.44■□□□□ 0.06
Pcdh18Q8VHR0 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh18Q8VHR0 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Pcdh18Q8VHR0 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh18Q8VHR0 Gm13181-201ENSMUST00000120117 1069 ntBASIC15.44■□□□□ 0.06
Pcdh18Q8VHR0 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC15.44■□□□□ 0.06
Pcdh18Q8VHR0 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Pcdh18Q8VHR0 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh18Q8VHR0 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC15.44■□□□□ 0.06
Pcdh18Q8VHR0 Otx2os1-204ENSMUST00000227221 751 ntBASIC15.44■□□□□ 0.06
Pcdh18Q8VHR0 Odf3b-204ENSMUST00000227834 930 ntBASIC15.44■□□□□ 0.06
Pcdh18Q8VHR0 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh18Q8VHR0 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh18Q8VHR0 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh18Q8VHR0 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh18Q8VHR0 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.44■□□□□ 0.06
Pcdh18Q8VHR0 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Pcdh18Q8VHR0 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Pcdh18Q8VHR0 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh18Q8VHR0 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh18Q8VHR0 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh18Q8VHR0 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.44■□□□□ 0.06
Pcdh18Q8VHR0 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh18Q8VHR0 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.44■□□□□ 0.06
Pcdh18Q8VHR0 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh18Q8VHR0 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh18Q8VHR0 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms