Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkd2Q8VE28 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Nkd2Q8VE28 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkd2Q8VE28 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nkd2Q8VE28 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkd2Q8VE28 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkd2Q8VE28 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkd2Q8VE28 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nkd2Q8VE28 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkd2Q8VE28 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkd2Q8VE28 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.61□□□□□ -0.07
Nkd2Q8VE28 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkd2Q8VE28 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.61□□□□□ -0.07
Nkd2Q8VE28 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkd2Q8VE28 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkd2Q8VE28 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkd2Q8VE28 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Nkd2Q8VE28 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Nkd2Q8VE28 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Nkd2Q8VE28 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkd2Q8VE28 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.61□□□□□ -0.07
Nkd2Q8VE28 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkd2Q8VE28 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Nkd2Q8VE28 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkd2Q8VE28 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkd2Q8VE28 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkd2Q8VE28 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkd2Q8VE28 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkd2Q8VE28 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.6□□□□□ -0.07
Nkd2Q8VE28 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkd2Q8VE28 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.6□□□□□ -0.07
Nkd2Q8VE28 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nkd2Q8VE28 Gm15794-201ENSMUST00000120182 631 ntBASIC14.6□□□□□ -0.07
Nkd2Q8VE28 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.6□□□□□ -0.07
Nkd2Q8VE28 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nkd2Q8VE28 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.6□□□□□ -0.07
Nkd2Q8VE28 Gm34391-201ENSMUST00000203706 907 ntBASIC14.6□□□□□ -0.07
Nkd2Q8VE28 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.6□□□□□ -0.07
Nkd2Q8VE28 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Nkd2Q8VE28 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nkd2Q8VE28 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkd2Q8VE28 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkd2Q8VE28 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkd2Q8VE28 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkd2Q8VE28 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkd2Q8VE28 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nkd2Q8VE28 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkd2Q8VE28 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkd2Q8VE28 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkd2Q8VE28 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkd2Q8VE28 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nkd2Q8VE28 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.59□□□□□ -0.07
Nkd2Q8VE28 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkd2Q8VE28 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkd2Q8VE28 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkd2Q8VE28 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nkd2Q8VE28 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkd2Q8VE28 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkd2Q8VE28 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Nkd2Q8VE28 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.59□□□□□ -0.07
Nkd2Q8VE28 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
Nkd2Q8VE28 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Nkd2Q8VE28 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nkd2Q8VE28 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.59□□□□□ -0.07
Nkd2Q8VE28 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Nkd2Q8VE28 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkd2Q8VE28 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.59□□□□□ -0.07
Nkd2Q8VE28 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkd2Q8VE28 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Nkd2Q8VE28 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nkd2Q8VE28 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkd2Q8VE28 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Nkd2Q8VE28 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
Nkd2Q8VE28 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nkd2Q8VE28 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.59□□□□□ -0.07
Nkd2Q8VE28 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkd2Q8VE28 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.59□□□□□ -0.07
Nkd2Q8VE28 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkd2Q8VE28 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Nkd2Q8VE28 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkd2Q8VE28 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkd2Q8VE28 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nkd2Q8VE28 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nkd2Q8VE28 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nkd2Q8VE28 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nkd2Q8VE28 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.58□□□□□ -0.07
Nkd2Q8VE28 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nkd2Q8VE28 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nkd2Q8VE28 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.07
Nkd2Q8VE28 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkd2Q8VE28 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkd2Q8VE28 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Nkd2Q8VE28 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.58□□□□□ -0.08
Nkd2Q8VE28 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.58□□□□□ -0.08
Nkd2Q8VE28 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkd2Q8VE28 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.58□□□□□ -0.08
Nkd2Q8VE28 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.58□□□□□ -0.08
Nkd2Q8VE28 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Nkd2Q8VE28 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
Nkd2Q8VE28 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms