Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trim68Q8K243 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trim68Q8K243 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim68Q8K243 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Trim68Q8K243 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim68Q8K243 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim68Q8K243 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim68Q8K243 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim68Q8K243 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Trim68Q8K243 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim68Q8K243 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Trim68Q8K243 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim68Q8K243 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Trim68Q8K243 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Trim68Q8K243 Gm12260-201ENSMUST00000122447 411 ntBASIC17.35■□□□□ 0.37
Trim68Q8K243 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Trim68Q8K243 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Trim68Q8K243 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim68Q8K243 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC17.35■□□□□ 0.37
Trim68Q8K243 Psmb5-202ENSMUST00000227257 622 ntBASIC17.35■□□□□ 0.37
Trim68Q8K243 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim68Q8K243 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim68Q8K243 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim68Q8K243 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim68Q8K243 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim68Q8K243 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim68Q8K243 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim68Q8K243 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Trim68Q8K243 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim68Q8K243 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim68Q8K243 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.35■□□□□ 0.37
Trim68Q8K243 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim68Q8K243 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Trim68Q8K243 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Trim68Q8K243 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim68Q8K243 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC17.34■□□□□ 0.37
Trim68Q8K243 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC17.34■□□□□ 0.37
Trim68Q8K243 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim68Q8K243 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.34■□□□□ 0.37
Trim68Q8K243 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim68Q8K243 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim68Q8K243 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim68Q8K243 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC17.34■□□□□ 0.37
Trim68Q8K243 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.34■□□□□ 0.37
Trim68Q8K243 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim68Q8K243 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim68Q8K243 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Trim68Q8K243 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim68Q8K243 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim68Q8K243 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
Trim68Q8K243 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Trim68Q8K243 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim68Q8K243 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trim68Q8K243 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Trim68Q8K243 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim68Q8K243 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim68Q8K243 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
Trim68Q8K243 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim68Q8K243 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim68Q8K243 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim68Q8K243 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim68Q8K243 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim68Q8K243 Gm23935-201ENSMUST00000102303 57 ntBASIC17.33■□□□□ 0.36
Trim68Q8K243 Gm24270-201ENSMUST00000102326 57 ntBASIC17.33■□□□□ 0.36
Trim68Q8K243 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC17.33■□□□□ 0.36
Trim68Q8K243 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC17.33■□□□□ 0.36
Trim68Q8K243 Gm24245-201ENSMUST00000157318 57 ntBASIC17.33■□□□□ 0.36
Trim68Q8K243 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim68Q8K243 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Trim68Q8K243 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Trim68Q8K243 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Trim68Q8K243 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim68Q8K243 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Trim68Q8K243 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim68Q8K243 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim68Q8K243 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC17.33■□□□□ 0.36
Trim68Q8K243 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim68Q8K243 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Trim68Q8K243 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim68Q8K243 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim68Q8K243 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim68Q8K243 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim68Q8K243 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim68Q8K243 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim68Q8K243 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim68Q8K243 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim68Q8K243 Gm15173-201ENSMUST00000122049 433 ntBASIC17.32■□□□□ 0.36
Trim68Q8K243 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.32■□□□□ 0.36
Trim68Q8K243 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Trim68Q8K243 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.32■□□□□ 0.36
Trim68Q8K243 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.32■□□□□ 0.36
Trim68Q8K243 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC17.32■□□□□ 0.36
Trim68Q8K243 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim68Q8K243 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Trim68Q8K243 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Trim68Q8K243 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim68Q8K243 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim68Q8K243 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim68Q8K243 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Trim68Q8K243 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms