Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Syne4Q8CII8 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC18.07■□□□□ 0.48
Syne4Q8CII8 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC18.07■□□□□ 0.48
Syne4Q8CII8 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Syne4Q8CII8 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Syne4Q8CII8 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Syne4Q8CII8 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC18.07■□□□□ 0.48
Syne4Q8CII8 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC18.07■□□□□ 0.48
Syne4Q8CII8 AC155252.2-201ENSMUST00000226946 680 ntBASIC18.07■□□□□ 0.48
Syne4Q8CII8 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Syne4Q8CII8 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Syne4Q8CII8 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Syne4Q8CII8 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Syne4Q8CII8 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Syne4Q8CII8 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Syne4Q8CII8 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Syne4Q8CII8 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Syne4Q8CII8 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Syne4Q8CII8 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.07■□□□□ 0.48
Syne4Q8CII8 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Syne4Q8CII8 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Syne4Q8CII8 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Syne4Q8CII8 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Syne4Q8CII8 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Syne4Q8CII8 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC18.06■□□□□ 0.48
Syne4Q8CII8 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Syne4Q8CII8 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC18.06■□□□□ 0.48
Syne4Q8CII8 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Syne4Q8CII8 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Syne4Q8CII8 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Syne4Q8CII8 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Syne4Q8CII8 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Syne4Q8CII8 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Syne4Q8CII8 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Syne4Q8CII8 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC18.06■□□□□ 0.48
Syne4Q8CII8 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Syne4Q8CII8 Gm18489-201ENSMUST00000172565 551 ntBASIC18.06■□□□□ 0.48
Syne4Q8CII8 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC18.06■□□□□ 0.48
Syne4Q8CII8 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Syne4Q8CII8 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Syne4Q8CII8 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Syne4Q8CII8 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Syne4Q8CII8 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Syne4Q8CII8 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Syne4Q8CII8 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Syne4Q8CII8 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Syne4Q8CII8 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Syne4Q8CII8 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Syne4Q8CII8 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Syne4Q8CII8 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Syne4Q8CII8 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Syne4Q8CII8 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Syne4Q8CII8 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Syne4Q8CII8 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.05■□□□□ 0.48
Syne4Q8CII8 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Syne4Q8CII8 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Syne4Q8CII8 AA543401-201ENSMUST00000164248 1269 ntBASIC18.05■□□□□ 0.48
Syne4Q8CII8 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC18.05■□□□□ 0.48
Syne4Q8CII8 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Syne4Q8CII8 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Syne4Q8CII8 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Syne4Q8CII8 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Syne4Q8CII8 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Syne4Q8CII8 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
Syne4Q8CII8 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC18.05■□□□□ 0.48
Syne4Q8CII8 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Syne4Q8CII8 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Syne4Q8CII8 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Syne4Q8CII8 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Syne4Q8CII8 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Syne4Q8CII8 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Syne4Q8CII8 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Syne4Q8CII8 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Syne4Q8CII8 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Syne4Q8CII8 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC18.04■□□□□ 0.48
Syne4Q8CII8 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC18.04■□□□□ 0.48
Syne4Q8CII8 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Syne4Q8CII8 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Syne4Q8CII8 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Syne4Q8CII8 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Syne4Q8CII8 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Syne4Q8CII8 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Syne4Q8CII8 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Syne4Q8CII8 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Syne4Q8CII8 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
Syne4Q8CII8 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Syne4Q8CII8 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Syne4Q8CII8 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC18.03■□□□□ 0.48
Syne4Q8CII8 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Syne4Q8CII8 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.03■□□□□ 0.48
Syne4Q8CII8 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Syne4Q8CII8 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.03■□□□□ 0.48
Syne4Q8CII8 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.03■□□□□ 0.48
Syne4Q8CII8 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC18.03■□□□□ 0.48
Syne4Q8CII8 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Syne4Q8CII8 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Syne4Q8CII8 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Syne4Q8CII8 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Syne4Q8CII8 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Syne4Q8CII8 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms