Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rab11fip3Q8CHD8 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rab11fip3Q8CHD8 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC20.66■□□□□ 0.9
Rab11fip3Q8CHD8 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC20.66■□□□□ 0.9
Rab11fip3Q8CHD8 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rab11fip3Q8CHD8 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Rab11fip3Q8CHD8 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rab11fip3Q8CHD8 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rab11fip3Q8CHD8 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rab11fip3Q8CHD8 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rab11fip3Q8CHD8 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rab11fip3Q8CHD8 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rab11fip3Q8CHD8 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Rab11fip3Q8CHD8 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC20.65■□□□□ 0.9
Rab11fip3Q8CHD8 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rab11fip3Q8CHD8 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC20.65■□□□□ 0.9
Rab11fip3Q8CHD8 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC20.65■□□□□ 0.9
Rab11fip3Q8CHD8 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC20.65■□□□□ 0.9
Rab11fip3Q8CHD8 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rab11fip3Q8CHD8 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rab11fip3Q8CHD8 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rab11fip3Q8CHD8 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Rab11fip3Q8CHD8 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
Rab11fip3Q8CHD8 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC20.65■□□□□ 0.9
Rab11fip3Q8CHD8 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rab11fip3Q8CHD8 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rab11fip3Q8CHD8 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rab11fip3Q8CHD8 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rab11fip3Q8CHD8 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Rab11fip3Q8CHD8 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rab11fip3Q8CHD8 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rab11fip3Q8CHD8 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rab11fip3Q8CHD8 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rab11fip3Q8CHD8 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rab11fip3Q8CHD8 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC20.64■□□□□ 0.89
Rab11fip3Q8CHD8 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rab11fip3Q8CHD8 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC20.64■□□□□ 0.89
Rab11fip3Q8CHD8 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Rab11fip3Q8CHD8 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC20.64■□□□□ 0.89
Rab11fip3Q8CHD8 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rab11fip3Q8CHD8 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Rab11fip3Q8CHD8 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rab11fip3Q8CHD8 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rab11fip3Q8CHD8 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rab11fip3Q8CHD8 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Rab11fip3Q8CHD8 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rab11fip3Q8CHD8 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rab11fip3Q8CHD8 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rab11fip3Q8CHD8 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rab11fip3Q8CHD8 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rab11fip3Q8CHD8 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rab11fip3Q8CHD8 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC20.63■□□□□ 0.89
Rab11fip3Q8CHD8 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rab11fip3Q8CHD8 Gm15358-201ENSMUST00000119249 520 ntBASIC20.63■□□□□ 0.89
Rab11fip3Q8CHD8 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rab11fip3Q8CHD8 Gm2308-201ENSMUST00000166539 1004 ntBASIC20.63■□□□□ 0.89
Rab11fip3Q8CHD8 AC084391.1-201ENSMUST00000200651 141 ntBASIC20.63■□□□□ 0.89
Rab11fip3Q8CHD8 Gm19164-201ENSMUST00000210667 640 ntBASIC20.63■□□□□ 0.89
Rab11fip3Q8CHD8 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rab11fip3Q8CHD8 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rab11fip3Q8CHD8 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rab11fip3Q8CHD8 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Rab11fip3Q8CHD8 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC20.63■□□□□ 0.89
Rab11fip3Q8CHD8 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rab11fip3Q8CHD8 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
Rab11fip3Q8CHD8 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rab11fip3Q8CHD8 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Rab11fip3Q8CHD8 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rab11fip3Q8CHD8 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
Rab11fip3Q8CHD8 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rab11fip3Q8CHD8 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rab11fip3Q8CHD8 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rab11fip3Q8CHD8 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rab11fip3Q8CHD8 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rab11fip3Q8CHD8 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC20.62■□□□□ 0.89
Rab11fip3Q8CHD8 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC20.62■□□□□ 0.89
Rab11fip3Q8CHD8 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Rab11fip3Q8CHD8 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rab11fip3Q8CHD8 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rab11fip3Q8CHD8 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rab11fip3Q8CHD8 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rab11fip3Q8CHD8 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rab11fip3Q8CHD8 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Rab11fip3Q8CHD8 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rab11fip3Q8CHD8 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rab11fip3Q8CHD8 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rab11fip3Q8CHD8 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Rab11fip3Q8CHD8 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Rab11fip3Q8CHD8 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
Rab11fip3Q8CHD8 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rab11fip3Q8CHD8 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Rab11fip3Q8CHD8 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rab11fip3Q8CHD8 Gm27628-201ENSMUST00000184911 107 ntBASIC20.61■□□□□ 0.89
Rab11fip3Q8CHD8 Gm43935-201ENSMUST00000203569 1050 ntBASIC20.61■□□□□ 0.89
Rab11fip3Q8CHD8 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC20.61■□□□□ 0.89
Rab11fip3Q8CHD8 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rab11fip3Q8CHD8 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rab11fip3Q8CHD8 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rab11fip3Q8CHD8 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rab11fip3Q8CHD8 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms