Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rdh1Q8CGV4 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.08
Rdh1Q8CGV4 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rdh1Q8CGV4 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rdh1Q8CGV4 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rdh1Q8CGV4 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC15.52■□□□□ 0.08
Rdh1Q8CGV4 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.52■□□□□ 0.08
Rdh1Q8CGV4 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rdh1Q8CGV4 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rdh1Q8CGV4 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC15.52■□□□□ 0.07
Rdh1Q8CGV4 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rdh1Q8CGV4 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Rdh1Q8CGV4 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC15.52■□□□□ 0.07
Rdh1Q8CGV4 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rdh1Q8CGV4 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rdh1Q8CGV4 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.51■□□□□ 0.07
Rdh1Q8CGV4 Gm8784-201ENSMUST00000222096 1435 ntBASIC15.51■□□□□ 0.07
Rdh1Q8CGV4 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rdh1Q8CGV4 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rdh1Q8CGV4 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Rdh1Q8CGV4 Gm12350-201ENSMUST00000121208 462 ntBASIC15.51■□□□□ 0.07
Rdh1Q8CGV4 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rdh1Q8CGV4 Mir5126-201ENSMUST00000175513 77 ntBASIC15.51■□□□□ 0.07
Rdh1Q8CGV4 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.51■□□□□ 0.07
Rdh1Q8CGV4 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rdh1Q8CGV4 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rdh1Q8CGV4 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rdh1Q8CGV4 Gm7292-201ENSMUST00000194706 2527 ntBASIC15.51■□□□□ 0.07
Rdh1Q8CGV4 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Rdh1Q8CGV4 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rdh1Q8CGV4 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rdh1Q8CGV4 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rdh1Q8CGV4 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rdh1Q8CGV4 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rdh1Q8CGV4 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rdh1Q8CGV4 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rdh1Q8CGV4 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rdh1Q8CGV4 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rdh1Q8CGV4 Gm18206-201ENSMUST00000207027 926 ntBASIC15.5■□□□□ 0.07
Rdh1Q8CGV4 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Rdh1Q8CGV4 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Rdh1Q8CGV4 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rdh1Q8CGV4 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rdh1Q8CGV4 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
Rdh1Q8CGV4 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rdh1Q8CGV4 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rdh1Q8CGV4 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Rdh1Q8CGV4 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rdh1Q8CGV4 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.49■□□□□ 0.07
Rdh1Q8CGV4 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rdh1Q8CGV4 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rdh1Q8CGV4 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rdh1Q8CGV4 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rdh1Q8CGV4 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rdh1Q8CGV4 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rdh1Q8CGV4 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rdh1Q8CGV4 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rdh1Q8CGV4 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rdh1Q8CGV4 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC15.49■□□□□ 0.07
Rdh1Q8CGV4 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC15.49■□□□□ 0.07
Rdh1Q8CGV4 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rdh1Q8CGV4 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rdh1Q8CGV4 Gm6550-201ENSMUST00000187574 993 ntBASIC15.49■□□□□ 0.07
Rdh1Q8CGV4 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rdh1Q8CGV4 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC15.49■□□□□ 0.07
Rdh1Q8CGV4 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.49■□□□□ 0.07
Rdh1Q8CGV4 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rdh1Q8CGV4 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rdh1Q8CGV4 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rdh1Q8CGV4 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rdh1Q8CGV4 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rdh1Q8CGV4 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rdh1Q8CGV4 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rdh1Q8CGV4 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Rdh1Q8CGV4 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rdh1Q8CGV4 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rdh1Q8CGV4 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rdh1Q8CGV4 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rdh1Q8CGV4 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rdh1Q8CGV4 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rdh1Q8CGV4 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rdh1Q8CGV4 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rdh1Q8CGV4 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rdh1Q8CGV4 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Rdh1Q8CGV4 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rdh1Q8CGV4 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rdh1Q8CGV4 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rdh1Q8CGV4 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rdh1Q8CGV4 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rdh1Q8CGV4 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rdh1Q8CGV4 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Rdh1Q8CGV4 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rdh1Q8CGV4 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rdh1Q8CGV4 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rdh1Q8CGV4 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rdh1Q8CGV4 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rdh1Q8CGV4 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.48■□□□□ 0.07
Rdh1Q8CGV4 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rdh1Q8CGV4 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC15.48■□□□□ 0.07
Rdh1Q8CGV4 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms