Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ShfQ8CG80 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ShfQ8CG80 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ShfQ8CG80 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC14.3□□□□□ -0.12
ShfQ8CG80 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.3□□□□□ -0.12
ShfQ8CG80 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
ShfQ8CG80 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ShfQ8CG80 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ShfQ8CG80 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
ShfQ8CG80 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
ShfQ8CG80 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ShfQ8CG80 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ShfQ8CG80 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ShfQ8CG80 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
ShfQ8CG80 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
ShfQ8CG80 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
ShfQ8CG80 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ShfQ8CG80 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
ShfQ8CG80 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
ShfQ8CG80 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ShfQ8CG80 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ShfQ8CG80 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ShfQ8CG80 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ShfQ8CG80 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
ShfQ8CG80 Gm37722-201ENSMUST00000193757 208 ntBASIC14.29□□□□□ -0.12
ShfQ8CG80 Gm44430-201ENSMUST00000203376 995 ntBASIC14.29□□□□□ -0.12
ShfQ8CG80 Gm18959-201ENSMUST00000208954 655 ntBASIC14.29□□□□□ -0.12
ShfQ8CG80 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
ShfQ8CG80 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ShfQ8CG80 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
ShfQ8CG80 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ShfQ8CG80 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
ShfQ8CG80 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
ShfQ8CG80 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ShfQ8CG80 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
ShfQ8CG80 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
ShfQ8CG80 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ShfQ8CG80 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ShfQ8CG80 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
ShfQ8CG80 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
ShfQ8CG80 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
ShfQ8CG80 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ShfQ8CG80 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ShfQ8CG80 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14.28□□□□□ -0.12
ShfQ8CG80 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
ShfQ8CG80 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ShfQ8CG80 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
ShfQ8CG80 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC14.28□□□□□ -0.12
ShfQ8CG80 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ShfQ8CG80 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ShfQ8CG80 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
ShfQ8CG80 Gm7889-201ENSMUST00000185591 958 ntBASIC14.28□□□□□ -0.12
ShfQ8CG80 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC14.28□□□□□ -0.12
ShfQ8CG80 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.28□□□□□ -0.12
ShfQ8CG80 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC14.28□□□□□ -0.12
ShfQ8CG80 AL672049.1-201ENSMUST00000197943 91 ntBASIC14.28□□□□□ -0.12
ShfQ8CG80 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.28□□□□□ -0.12
ShfQ8CG80 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC14.28□□□□□ -0.12
ShfQ8CG80 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.28□□□□□ -0.12
ShfQ8CG80 AC134329.2-201ENSMUST00000217897 428 ntBASIC14.28□□□□□ -0.12
ShfQ8CG80 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ShfQ8CG80 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ShfQ8CG80 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.28□□□□□ -0.12
ShfQ8CG80 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ShfQ8CG80 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ShfQ8CG80 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ShfQ8CG80 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
ShfQ8CG80 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ShfQ8CG80 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ShfQ8CG80 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ShfQ8CG80 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ShfQ8CG80 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ShfQ8CG80 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
ShfQ8CG80 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
ShfQ8CG80 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
ShfQ8CG80 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ShfQ8CG80 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ShfQ8CG80 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.27□□□□□ -0.12
ShfQ8CG80 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ShfQ8CG80 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.12
ShfQ8CG80 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.27□□□□□ -0.12
ShfQ8CG80 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
ShfQ8CG80 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ShfQ8CG80 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
ShfQ8CG80 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC14.27□□□□□ -0.12
ShfQ8CG80 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ShfQ8CG80 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ShfQ8CG80 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
ShfQ8CG80 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.27□□□□□ -0.12
ShfQ8CG80 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
ShfQ8CG80 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ShfQ8CG80 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.27□□□□□ -0.13
ShfQ8CG80 Gm10052-201ENSMUST00000168019 960 ntBASIC14.27□□□□□ -0.13
ShfQ8CG80 Gm27389-201ENSMUST00000183622 195 ntBASIC14.27□□□□□ -0.13
ShfQ8CG80 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ShfQ8CG80 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
ShfQ8CG80 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ShfQ8CG80 Gm7729-201ENSMUST00000050143 801 ntBASIC14.27□□□□□ -0.13
ShfQ8CG80 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ShfQ8CG80 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms