Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps53Q8CCB4 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Vps53Q8CCB4 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Vps53Q8CCB4 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Vps53Q8CCB4 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Vps53Q8CCB4 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps53Q8CCB4 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps53Q8CCB4 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps53Q8CCB4 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps53Q8CCB4 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
Vps53Q8CCB4 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Vps53Q8CCB4 Gm44450-201ENSMUST00000199528 114 ntBASIC18.6■□□□□ 0.57
Vps53Q8CCB4 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC18.6■□□□□ 0.57
Vps53Q8CCB4 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps53Q8CCB4 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps53Q8CCB4 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
Vps53Q8CCB4 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Vps53Q8CCB4 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC18.6■□□□□ 0.57
Vps53Q8CCB4 Zfp264-201ENSMUST00000208656 1563 ntBASIC18.59■□□□□ 0.57
Vps53Q8CCB4 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps53Q8CCB4 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Vps53Q8CCB4 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps53Q8CCB4 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps53Q8CCB4 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Vps53Q8CCB4 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps53Q8CCB4 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Vps53Q8CCB4 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Vps53Q8CCB4 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps53Q8CCB4 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC18.59■□□□□ 0.57
Vps53Q8CCB4 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Vps53Q8CCB4 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC18.59■□□□□ 0.57
Vps53Q8CCB4 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC18.59■□□□□ 0.57
Vps53Q8CCB4 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
Vps53Q8CCB4 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Vps53Q8CCB4 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps53Q8CCB4 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
Vps53Q8CCB4 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps53Q8CCB4 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Vps53Q8CCB4 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps53Q8CCB4 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps53Q8CCB4 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC18.59■□□□□ 0.57
Vps53Q8CCB4 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Vps53Q8CCB4 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps53Q8CCB4 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Vps53Q8CCB4 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps53Q8CCB4 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Vps53Q8CCB4 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Vps53Q8CCB4 AC115863.1-201ENSMUST00000214815 1813 ntBASIC18.58■□□□□ 0.57
Vps53Q8CCB4 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Vps53Q8CCB4 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC18.58■□□□□ 0.57
Vps53Q8CCB4 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Vps53Q8CCB4 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC18.58■□□□□ 0.57
Vps53Q8CCB4 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
Vps53Q8CCB4 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC18.58■□□□□ 0.57
Vps53Q8CCB4 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Vps53Q8CCB4 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Vps53Q8CCB4 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Vps53Q8CCB4 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Vps53Q8CCB4 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Vps53Q8CCB4 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Vps53Q8CCB4 Gm42918-201ENSMUST00000199249 1580 ntBASIC18.58■□□□□ 0.56
Vps53Q8CCB4 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Vps53Q8CCB4 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Vps53Q8CCB4 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
Vps53Q8CCB4 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Vps53Q8CCB4 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Vps53Q8CCB4 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vps53Q8CCB4 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Vps53Q8CCB4 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vps53Q8CCB4 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Vps53Q8CCB4 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Vps53Q8CCB4 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC18.57■□□□□ 0.56
Vps53Q8CCB4 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Vps53Q8CCB4 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Vps53Q8CCB4 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC18.57■□□□□ 0.56
Vps53Q8CCB4 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC18.57■□□□□ 0.56
Vps53Q8CCB4 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Vps53Q8CCB4 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Vps53Q8CCB4 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC18.57■□□□□ 0.56
Vps53Q8CCB4 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vps53Q8CCB4 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vps53Q8CCB4 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Vps53Q8CCB4 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vps53Q8CCB4 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vps53Q8CCB4 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vps53Q8CCB4 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vps53Q8CCB4 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
Vps53Q8CCB4 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Vps53Q8CCB4 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vps53Q8CCB4 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vps53Q8CCB4 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vps53Q8CCB4 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vps53Q8CCB4 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
Vps53Q8CCB4 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Vps53Q8CCB4 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Vps53Q8CCB4 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Vps53Q8CCB4 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vps53Q8CCB4 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Vps53Q8CCB4 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vps53Q8CCB4 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms