Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Shisa4Q8CA71 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
Shisa4Q8CA71 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Shisa4Q8CA71 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Shisa4Q8CA71 App-207ENSMUST00000227737 2827 ntBASIC18.55■□□□□ 0.56
Shisa4Q8CA71 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
Shisa4Q8CA71 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC18.54■□□□□ 0.56
Shisa4Q8CA71 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Shisa4Q8CA71 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Shisa4Q8CA71 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Shisa4Q8CA71 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Shisa4Q8CA71 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Shisa4Q8CA71 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
Shisa4Q8CA71 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Shisa4Q8CA71 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC18.54■□□□□ 0.56
Shisa4Q8CA71 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
Shisa4Q8CA71 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC18.54■□□□□ 0.56
Shisa4Q8CA71 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC18.54■□□□□ 0.56
Shisa4Q8CA71 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC18.54■□□□□ 0.56
Shisa4Q8CA71 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC18.54■□□□□ 0.56
Shisa4Q8CA71 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Shisa4Q8CA71 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC18.54■□□□□ 0.56
Shisa4Q8CA71 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Shisa4Q8CA71 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
Shisa4Q8CA71 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Shisa4Q8CA71 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Shisa4Q8CA71 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Shisa4Q8CA71 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Shisa4Q8CA71 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Shisa4Q8CA71 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Shisa4Q8CA71 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Shisa4Q8CA71 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC18.53■□□□□ 0.56
Shisa4Q8CA71 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Shisa4Q8CA71 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Shisa4Q8CA71 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Shisa4Q8CA71 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Shisa4Q8CA71 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC18.53■□□□□ 0.56
Shisa4Q8CA71 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Shisa4Q8CA71 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Shisa4Q8CA71 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Shisa4Q8CA71 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.53■□□□□ 0.56
Shisa4Q8CA71 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Shisa4Q8CA71 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Shisa4Q8CA71 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Shisa4Q8CA71 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Shisa4Q8CA71 Gm42918-201ENSMUST00000199249 1580 ntBASIC18.52■□□□□ 0.56
Shisa4Q8CA71 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Shisa4Q8CA71 Grk6-207ENSMUST00000225925 2769 ntBASIC18.52■□□□□ 0.56
Shisa4Q8CA71 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Shisa4Q8CA71 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Shisa4Q8CA71 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC18.52■□□□□ 0.56
Shisa4Q8CA71 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Shisa4Q8CA71 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Shisa4Q8CA71 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC18.52■□□□□ 0.56
Shisa4Q8CA71 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Shisa4Q8CA71 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC18.52■□□□□ 0.56
Shisa4Q8CA71 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC18.52■□□□□ 0.55
Shisa4Q8CA71 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Shisa4Q8CA71 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Shisa4Q8CA71 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC18.51■□□□□ 0.55
Shisa4Q8CA71 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Shisa4Q8CA71 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Shisa4Q8CA71 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Shisa4Q8CA71 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Shisa4Q8CA71 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC18.51■□□□□ 0.55
Shisa4Q8CA71 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Shisa4Q8CA71 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Shisa4Q8CA71 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Shisa4Q8CA71 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Shisa4Q8CA71 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Shisa4Q8CA71 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Shisa4Q8CA71 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Shisa4Q8CA71 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Shisa4Q8CA71 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC18.51■□□□□ 0.55
Shisa4Q8CA71 Gm27646-201ENSMUST00000183989 110 ntBASIC18.51■□□□□ 0.55
Shisa4Q8CA71 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC18.51■□□□□ 0.55
Shisa4Q8CA71 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Shisa4Q8CA71 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC18.51■□□□□ 0.55
Shisa4Q8CA71 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Shisa4Q8CA71 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Shisa4Q8CA71 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Shisa4Q8CA71 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Shisa4Q8CA71 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Shisa4Q8CA71 Gm5837-201ENSMUST00000191844 1369 ntBASIC18.51■□□□□ 0.55
Shisa4Q8CA71 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Shisa4Q8CA71 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Shisa4Q8CA71 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Shisa4Q8CA71 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Shisa4Q8CA71 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Shisa4Q8CA71 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Shisa4Q8CA71 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Shisa4Q8CA71 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Shisa4Q8CA71 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Shisa4Q8CA71 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Shisa4Q8CA71 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Shisa4Q8CA71 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Shisa4Q8CA71 Gm25990-201ENSMUST00000102440 86 ntBASIC18.5■□□□□ 0.55
Shisa4Q8CA71 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Shisa4Q8CA71 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC18.5■□□□□ 0.55
Shisa4Q8CA71 Gm7862-201ENSMUST00000121461 292 ntBASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms