Protein–RNA interactions for Protein: Q8BTU7

Rccd1, RCC1 domain-containing protein 1, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rccd1Q8BTU7 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rccd1Q8BTU7 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rccd1Q8BTU7 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rccd1Q8BTU7 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rccd1Q8BTU7 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rccd1Q8BTU7 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rccd1Q8BTU7 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rccd1Q8BTU7 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rccd1Q8BTU7 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rccd1Q8BTU7 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Rccd1Q8BTU7 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rccd1Q8BTU7 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rccd1Q8BTU7 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rccd1Q8BTU7 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.32■□□□□ 0.2
Rccd1Q8BTU7 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rccd1Q8BTU7 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC16.32■□□□□ 0.2
Rccd1Q8BTU7 Gm36967-201ENSMUST00000193814 266 ntBASIC16.32■□□□□ 0.2
Rccd1Q8BTU7 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.32■□□□□ 0.2
Rccd1Q8BTU7 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Rccd1Q8BTU7 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.32■□□□□ 0.2
Rccd1Q8BTU7 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC16.32■□□□□ 0.2
Rccd1Q8BTU7 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rccd1Q8BTU7 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rccd1Q8BTU7 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rccd1Q8BTU7 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rccd1Q8BTU7 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rccd1Q8BTU7 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Rccd1Q8BTU7 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rccd1Q8BTU7 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rccd1Q8BTU7 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rccd1Q8BTU7 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rccd1Q8BTU7 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rccd1Q8BTU7 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rccd1Q8BTU7 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Rccd1Q8BTU7 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.31■□□□□ 0.2
Rccd1Q8BTU7 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Rccd1Q8BTU7 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rccd1Q8BTU7 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Rccd1Q8BTU7 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Rccd1Q8BTU7 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rccd1Q8BTU7 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rccd1Q8BTU7 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Rccd1Q8BTU7 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rccd1Q8BTU7 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rccd1Q8BTU7 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.31■□□□□ 0.2
Rccd1Q8BTU7 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rccd1Q8BTU7 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rccd1Q8BTU7 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rccd1Q8BTU7 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rccd1Q8BTU7 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rccd1Q8BTU7 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rccd1Q8BTU7 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Rccd1Q8BTU7 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rccd1Q8BTU7 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC16.3■□□□□ 0.2
Rccd1Q8BTU7 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.3■□□□□ 0.2
Rccd1Q8BTU7 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rccd1Q8BTU7 Gm5643-201ENSMUST00000117081 966 ntBASIC16.3■□□□□ 0.2
Rccd1Q8BTU7 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rccd1Q8BTU7 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rccd1Q8BTU7 Gm44450-201ENSMUST00000199528 114 ntBASIC16.3■□□□□ 0.2
Rccd1Q8BTU7 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC16.3■□□□□ 0.2
Rccd1Q8BTU7 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.3■□□□□ 0.2
Rccd1Q8BTU7 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC16.3■□□□□ 0.2
Rccd1Q8BTU7 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Rccd1Q8BTU7 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rccd1Q8BTU7 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Rccd1Q8BTU7 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rccd1Q8BTU7 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rccd1Q8BTU7 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rccd1Q8BTU7 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Rccd1Q8BTU7 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rccd1Q8BTU7 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.29■□□□□ 0.2
Rccd1Q8BTU7 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rccd1Q8BTU7 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rccd1Q8BTU7 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rccd1Q8BTU7 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rccd1Q8BTU7 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rccd1Q8BTU7 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rccd1Q8BTU7 AC174678.1-201ENSMUST00000228007 2749 ntBASIC16.29■□□□□ 0.2
Rccd1Q8BTU7 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Rccd1Q8BTU7 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rccd1Q8BTU7 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rccd1Q8BTU7 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rccd1Q8BTU7 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rccd1Q8BTU7 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Rccd1Q8BTU7 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Rccd1Q8BTU7 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rccd1Q8BTU7 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC16.28■□□□□ 0.2
Rccd1Q8BTU7 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rccd1Q8BTU7 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rccd1Q8BTU7 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rccd1Q8BTU7 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rccd1Q8BTU7 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
Rccd1Q8BTU7 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rccd1Q8BTU7 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.28■□□□□ 0.2
Rccd1Q8BTU7 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.28■□□□□ 0.2
Rccd1Q8BTU7 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.28■□□□□ 0.2
Rccd1Q8BTU7 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rccd1Q8BTU7 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rccd1Q8BTU7 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms