Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
Cpsf4Q8BQZ5 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cpsf4Q8BQZ5 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cpsf4Q8BQZ5 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cpsf4Q8BQZ5 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Cpsf4Q8BQZ5 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cpsf4Q8BQZ5 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cpsf4Q8BQZ5 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cpsf4Q8BQZ5 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cpsf4Q8BQZ5 Gm11950-201ENSMUST00000121615 838 ntBASIC15.57■□□□□ 0.08
Cpsf4Q8BQZ5 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cpsf4Q8BQZ5 Gm44450-201ENSMUST00000199528 114 ntBASIC15.57■□□□□ 0.08
Cpsf4Q8BQZ5 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cpsf4Q8BQZ5 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cpsf4Q8BQZ5 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cpsf4Q8BQZ5 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cpsf4Q8BQZ5 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cpsf4Q8BQZ5 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
Cpsf4Q8BQZ5 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cpsf4Q8BQZ5 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cpsf4Q8BQZ5 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cpsf4Q8BQZ5 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cpsf4Q8BQZ5 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cpsf4Q8BQZ5 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cpsf4Q8BQZ5 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cpsf4Q8BQZ5 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cpsf4Q8BQZ5 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cpsf4Q8BQZ5 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cpsf4Q8BQZ5 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cpsf4Q8BQZ5 Gm6623-201ENSMUST00000173570 544 ntBASIC15.56■□□□□ 0.08
Cpsf4Q8BQZ5 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC15.56■□□□□ 0.08
Cpsf4Q8BQZ5 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cpsf4Q8BQZ5 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC15.56■□□□□ 0.08
Cpsf4Q8BQZ5 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC15.56■□□□□ 0.08
Cpsf4Q8BQZ5 AC122351.1-201ENSMUST00000220467 126 ntBASIC15.56■□□□□ 0.08
Cpsf4Q8BQZ5 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Cpsf4Q8BQZ5 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cpsf4Q8BQZ5 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cpsf4Q8BQZ5 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cpsf4Q8BQZ5 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cpsf4Q8BQZ5 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cpsf4Q8BQZ5 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cpsf4Q8BQZ5 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cpsf4Q8BQZ5 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cpsf4Q8BQZ5 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cpsf4Q8BQZ5 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cpsf4Q8BQZ5 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cpsf4Q8BQZ5 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cpsf4Q8BQZ5 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cpsf4Q8BQZ5 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cpsf4Q8BQZ5 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Cpsf4Q8BQZ5 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.55■□□□□ 0.08
Cpsf4Q8BQZ5 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cpsf4Q8BQZ5 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cpsf4Q8BQZ5 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cpsf4Q8BQZ5 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cpsf4Q8BQZ5 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.55■□□□□ 0.08
Cpsf4Q8BQZ5 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
Cpsf4Q8BQZ5 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cpsf4Q8BQZ5 Gm27704-201ENSMUST00000185094 107 ntBASIC15.55■□□□□ 0.08
Cpsf4Q8BQZ5 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC15.55■□□□□ 0.08
Cpsf4Q8BQZ5 Gm18115-201ENSMUST00000221209 621 ntBASIC15.55■□□□□ 0.08
Cpsf4Q8BQZ5 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
Cpsf4Q8BQZ5 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cpsf4Q8BQZ5 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Cpsf4Q8BQZ5 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cpsf4Q8BQZ5 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cpsf4Q8BQZ5 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cpsf4Q8BQZ5 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cpsf4Q8BQZ5 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cpsf4Q8BQZ5 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cpsf4Q8BQZ5 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cpsf4Q8BQZ5 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cpsf4Q8BQZ5 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cpsf4Q8BQZ5 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.54■□□□□ 0.08
Cpsf4Q8BQZ5 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cpsf4Q8BQZ5 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cpsf4Q8BQZ5 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cpsf4Q8BQZ5 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cpsf4Q8BQZ5 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cpsf4Q8BQZ5 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
Cpsf4Q8BQZ5 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cpsf4Q8BQZ5 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cpsf4Q8BQZ5 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cpsf4Q8BQZ5 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cpsf4Q8BQZ5 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cpsf4Q8BQZ5 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Cpsf4Q8BQZ5 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
Cpsf4Q8BQZ5 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cpsf4Q8BQZ5 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cpsf4Q8BQZ5 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Cpsf4Q8BQZ5 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cpsf4Q8BQZ5 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cpsf4Q8BQZ5 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpsf4Q8BQZ5 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpsf4Q8BQZ5 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cpsf4Q8BQZ5 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpsf4Q8BQZ5 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cpsf4Q8BQZ5 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC15.53■□□□□ 0.08
Cpsf4Q8BQZ5 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms