Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC18.8■□□□□ 0.6
Samm50Q8BGH2 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Samm50Q8BGH2 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Samm50Q8BGH2 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Samm50Q8BGH2 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Samm50Q8BGH2 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Samm50Q8BGH2 Gm29518-201ENSMUST00000190858 372 ntBASIC18.8■□□□□ 0.6
Samm50Q8BGH2 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Samm50Q8BGH2 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Samm50Q8BGH2 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Samm50Q8BGH2 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Samm50Q8BGH2 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Samm50Q8BGH2 AC153526.5-201ENSMUST00000218661 2147 ntBASIC18.8■□□□□ 0.6
Samm50Q8BGH2 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Samm50Q8BGH2 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Samm50Q8BGH2 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Samm50Q8BGH2 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Samm50Q8BGH2 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC18.8■□□□□ 0.6
Samm50Q8BGH2 Gm6190-201ENSMUST00000220683 1374 ntBASIC18.8■□□□□ 0.6
Samm50Q8BGH2 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Samm50Q8BGH2 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Samm50Q8BGH2 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Samm50Q8BGH2 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Samm50Q8BGH2 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Samm50Q8BGH2 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Samm50Q8BGH2 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Samm50Q8BGH2 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Samm50Q8BGH2 Gm6623-201ENSMUST00000173570 544 ntBASIC18.79■□□□□ 0.6
Samm50Q8BGH2 Gm17808-201ENSMUST00000200859 894 ntBASIC18.79■□□□□ 0.6
Samm50Q8BGH2 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Samm50Q8BGH2 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Samm50Q8BGH2 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Samm50Q8BGH2 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Samm50Q8BGH2 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Samm50Q8BGH2 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Samm50Q8BGH2 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Samm50Q8BGH2 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Samm50Q8BGH2 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Samm50Q8BGH2 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Samm50Q8BGH2 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Samm50Q8BGH2 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Samm50Q8BGH2 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Samm50Q8BGH2 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Samm50Q8BGH2 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Samm50Q8BGH2 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Samm50Q8BGH2 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Samm50Q8BGH2 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
Samm50Q8BGH2 Mir770-201ENSMUST00000103252 94 ntBASIC18.78■□□□□ 0.6
Samm50Q8BGH2 Gm11860-201ENSMUST00000122346 1010 ntBASIC18.78■□□□□ 0.6
Samm50Q8BGH2 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC18.78■□□□□ 0.6
Samm50Q8BGH2 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Samm50Q8BGH2 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Samm50Q8BGH2 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Samm50Q8BGH2 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Samm50Q8BGH2 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Samm50Q8BGH2 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC18.78■□□□□ 0.6
Samm50Q8BGH2 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Samm50Q8BGH2 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Samm50Q8BGH2 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Samm50Q8BGH2 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Samm50Q8BGH2 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Samm50Q8BGH2 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Samm50Q8BGH2 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC18.78■□□□□ 0.6
Samm50Q8BGH2 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Samm50Q8BGH2 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Samm50Q8BGH2 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Samm50Q8BGH2 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Samm50Q8BGH2 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Samm50Q8BGH2 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Samm50Q8BGH2 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Samm50Q8BGH2 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Samm50Q8BGH2 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
Samm50Q8BGH2 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC18.77■□□□□ 0.6
Samm50Q8BGH2 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Samm50Q8BGH2 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Samm50Q8BGH2 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Samm50Q8BGH2 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Samm50Q8BGH2 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Samm50Q8BGH2 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Samm50Q8BGH2 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC18.77■□□□□ 0.6
Samm50Q8BGH2 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Samm50Q8BGH2 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Samm50Q8BGH2 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Samm50Q8BGH2 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Samm50Q8BGH2 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Samm50Q8BGH2 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Samm50Q8BGH2 Zkscan3-208ENSMUST00000224820 5398 ntBASIC18.76■□□□□ 0.59
Samm50Q8BGH2 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Samm50Q8BGH2 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Samm50Q8BGH2 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Samm50Q8BGH2 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Samm50Q8BGH2 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Samm50Q8BGH2 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Samm50Q8BGH2 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Samm50Q8BGH2 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Samm50Q8BGH2 Gm7284-201ENSMUST00000131667 944 ntBASIC18.76■□□□□ 0.59
Samm50Q8BGH2 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC18.76■□□□□ 0.59
Samm50Q8BGH2 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Samm50Q8BGH2 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Samm50Q8BGH2 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms