Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Upk3bQ80YF6 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Upk3bQ80YF6 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Upk3bQ80YF6 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Upk3bQ80YF6 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Upk3bQ80YF6 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Upk3bQ80YF6 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Upk3bQ80YF6 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Upk3bQ80YF6 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Upk3bQ80YF6 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Upk3bQ80YF6 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Upk3bQ80YF6 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Upk3bQ80YF6 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Upk3bQ80YF6 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC13.56□□□□□ -0.24
Upk3bQ80YF6 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Upk3bQ80YF6 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Upk3bQ80YF6 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC13.56□□□□□ -0.24
Upk3bQ80YF6 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Upk3bQ80YF6 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Upk3bQ80YF6 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Upk3bQ80YF6 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Upk3bQ80YF6 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Upk3bQ80YF6 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Upk3bQ80YF6 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Upk3bQ80YF6 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Upk3bQ80YF6 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Upk3bQ80YF6 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Upk3bQ80YF6 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Upk3bQ80YF6 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Upk3bQ80YF6 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Upk3bQ80YF6 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Upk3bQ80YF6 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Upk3bQ80YF6 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Upk3bQ80YF6 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Upk3bQ80YF6 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Upk3bQ80YF6 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Upk3bQ80YF6 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Upk3bQ80YF6 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Upk3bQ80YF6 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Upk3bQ80YF6 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Upk3bQ80YF6 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Upk3bQ80YF6 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Upk3bQ80YF6 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Upk3bQ80YF6 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC13.55□□□□□ -0.24
Upk3bQ80YF6 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Upk3bQ80YF6 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Upk3bQ80YF6 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC13.55□□□□□ -0.24
Upk3bQ80YF6 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Upk3bQ80YF6 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Upk3bQ80YF6 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC13.55□□□□□ -0.24
Upk3bQ80YF6 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC13.55□□□□□ -0.24
Upk3bQ80YF6 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Upk3bQ80YF6 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC13.55□□□□□ -0.24
Upk3bQ80YF6 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC13.55□□□□□ -0.24
Upk3bQ80YF6 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Upk3bQ80YF6 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Upk3bQ80YF6 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Upk3bQ80YF6 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC13.55□□□□□ -0.24
Upk3bQ80YF6 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Upk3bQ80YF6 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Upk3bQ80YF6 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Upk3bQ80YF6 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Upk3bQ80YF6 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
Upk3bQ80YF6 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Upk3bQ80YF6 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC13.55□□□□□ -0.24
Upk3bQ80YF6 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Upk3bQ80YF6 AC163637.1-201ENSMUST00000215491 1894 ntBASIC13.55□□□□□ -0.24
Upk3bQ80YF6 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Upk3bQ80YF6 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Upk3bQ80YF6 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Upk3bQ80YF6 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Upk3bQ80YF6 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Upk3bQ80YF6 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Upk3bQ80YF6 Gm715-201ENSMUST00000117865 831 ntBASIC13.54□□□□□ -0.24
Upk3bQ80YF6 Gm13168-201ENSMUST00000121771 632 ntBASIC13.54□□□□□ -0.24
Upk3bQ80YF6 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Upk3bQ80YF6 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC13.54□□□□□ -0.24
Upk3bQ80YF6 Gm29707-201ENSMUST00000196325 491 ntBASIC13.54□□□□□ -0.24
Upk3bQ80YF6 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC13.54□□□□□ -0.24
Upk3bQ80YF6 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Upk3bQ80YF6 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Upk3bQ80YF6 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Upk3bQ80YF6 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Upk3bQ80YF6 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Upk3bQ80YF6 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Upk3bQ80YF6 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Upk3bQ80YF6 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Upk3bQ80YF6 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Upk3bQ80YF6 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC13.54□□□□□ -0.24
Upk3bQ80YF6 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Upk3bQ80YF6 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC13.54□□□□□ -0.24
Upk3bQ80YF6 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Upk3bQ80YF6 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Upk3bQ80YF6 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC13.54□□□□□ -0.24
Upk3bQ80YF6 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Upk3bQ80YF6 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Upk3bQ80YF6 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Upk3bQ80YF6 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Upk3bQ80YF6 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Upk3bQ80YF6 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms