Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh19Q80TF3 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.69■□□□□ 0.1
Pcdh19Q80TF3 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh19Q80TF3 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh19Q80TF3 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh19Q80TF3 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh19Q80TF3 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh19Q80TF3 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh19Q80TF3 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh19Q80TF3 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh19Q80TF3 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.69■□□□□ 0.1
Pcdh19Q80TF3 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Pcdh19Q80TF3 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh19Q80TF3 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Pcdh19Q80TF3 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh19Q80TF3 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Pcdh19Q80TF3 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Pcdh19Q80TF3 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh19Q80TF3 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh19Q80TF3 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC15.68■□□□□ 0.1
Pcdh19Q80TF3 Gm2651-201ENSMUST00000203560 838 ntBASIC15.68■□□□□ 0.1
Pcdh19Q80TF3 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh19Q80TF3 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh19Q80TF3 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh19Q80TF3 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh19Q80TF3 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh19Q80TF3 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh19Q80TF3 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh19Q80TF3 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh19Q80TF3 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.68■□□□□ 0.1
Pcdh19Q80TF3 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Pcdh19Q80TF3 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh19Q80TF3 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh19Q80TF3 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh19Q80TF3 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh19Q80TF3 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh19Q80TF3 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh19Q80TF3 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh19Q80TF3 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh19Q80TF3 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh19Q80TF3 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh19Q80TF3 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh19Q80TF3 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh19Q80TF3 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC15.67■□□□□ 0.1
Pcdh19Q80TF3 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh19Q80TF3 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh19Q80TF3 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.67■□□□□ 0.1
Pcdh19Q80TF3 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh19Q80TF3 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh19Q80TF3 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh19Q80TF3 Gm8097-201ENSMUST00000117903 829 ntBASIC15.67■□□□□ 0.1
Pcdh19Q80TF3 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC15.67■□□□□ 0.1
Pcdh19Q80TF3 Gm10060-201ENSMUST00000212002 111 ntBASIC15.67■□□□□ 0.1
Pcdh19Q80TF3 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh19Q80TF3 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh19Q80TF3 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.67■□□□□ 0.1
Pcdh19Q80TF3 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh19Q80TF3 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Pcdh19Q80TF3 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh19Q80TF3 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh19Q80TF3 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC15.67■□□□□ 0.1
Pcdh19Q80TF3 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh19Q80TF3 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh19Q80TF3 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh19Q80TF3 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh19Q80TF3 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh19Q80TF3 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh19Q80TF3 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh19Q80TF3 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh19Q80TF3 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.66■□□□□ 0.1
Pcdh19Q80TF3 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh19Q80TF3 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh19Q80TF3 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh19Q80TF3 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Pcdh19Q80TF3 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh19Q80TF3 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh19Q80TF3 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC15.66■□□□□ 0.1
Pcdh19Q80TF3 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh19Q80TF3 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Pcdh19Q80TF3 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh19Q80TF3 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Pcdh19Q80TF3 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh19Q80TF3 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh19Q80TF3 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh19Q80TF3 Gm43514-201ENSMUST00000198852 424 ntBASIC15.66■□□□□ 0.1
Pcdh19Q80TF3 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC15.66■□□□□ 0.1
Pcdh19Q80TF3 AC154757.1-201ENSMUST00000228289 336 ntBASIC15.66■□□□□ 0.1
Pcdh19Q80TF3 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh19Q80TF3 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Pcdh19Q80TF3 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Pcdh19Q80TF3 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh19Q80TF3 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh19Q80TF3 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.66■□□□□ 0.1
Pcdh19Q80TF3 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh19Q80TF3 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh19Q80TF3 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh19Q80TF3 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh19Q80TF3 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh19Q80TF3 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdh19Q80TF3 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms