Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nup98Q6PFD9 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Nup98Q6PFD9 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nup98Q6PFD9 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nup98Q6PFD9 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nup98Q6PFD9 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nup98Q6PFD9 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nup98Q6PFD9 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nup98Q6PFD9 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nup98Q6PFD9 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.74■□□□□ 0.59
Nup98Q6PFD9 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nup98Q6PFD9 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
Nup98Q6PFD9 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nup98Q6PFD9 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nup98Q6PFD9 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nup98Q6PFD9 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nup98Q6PFD9 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC18.73■□□□□ 0.59
Nup98Q6PFD9 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nup98Q6PFD9 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Nup98Q6PFD9 Gm14722-201ENSMUST00000118943 689 ntBASIC18.73■□□□□ 0.59
Nup98Q6PFD9 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC18.73■□□□□ 0.59
Nup98Q6PFD9 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nup98Q6PFD9 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Nup98Q6PFD9 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC18.73■□□□□ 0.59
Nup98Q6PFD9 Gm27301-201ENSMUST00000184012 127 ntBASIC18.73■□□□□ 0.59
Nup98Q6PFD9 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC18.73■□□□□ 0.59
Nup98Q6PFD9 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nup98Q6PFD9 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nup98Q6PFD9 Gm7669-201ENSMUST00000210184 1603 ntBASIC18.73■□□□□ 0.59
Nup98Q6PFD9 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nup98Q6PFD9 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nup98Q6PFD9 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nup98Q6PFD9 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nup98Q6PFD9 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nup98Q6PFD9 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC18.72■□□□□ 0.59
Nup98Q6PFD9 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC18.72■□□□□ 0.59
Nup98Q6PFD9 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Nup98Q6PFD9 AC160980.1-201ENSMUST00000224136 970 ntBASIC18.72■□□□□ 0.59
Nup98Q6PFD9 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nup98Q6PFD9 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nup98Q6PFD9 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nup98Q6PFD9 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nup98Q6PFD9 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.72■□□□□ 0.59
Nup98Q6PFD9 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nup98Q6PFD9 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nup98Q6PFD9 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nup98Q6PFD9 Gm15427-201ENSMUST00000117288 531 ntBASIC18.72■□□□□ 0.59
Nup98Q6PFD9 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC18.72■□□□□ 0.59
Nup98Q6PFD9 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC18.72■□□□□ 0.59
Nup98Q6PFD9 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC18.72■□□□□ 0.59
Nup98Q6PFD9 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Nup98Q6PFD9 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nup98Q6PFD9 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nup98Q6PFD9 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Nup98Q6PFD9 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.71■□□□□ 0.59
Nup98Q6PFD9 Gm12008-201ENSMUST00000117791 755 ntBASIC18.71■□□□□ 0.59
Nup98Q6PFD9 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC18.71■□□□□ 0.59
Nup98Q6PFD9 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nup98Q6PFD9 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nup98Q6PFD9 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Nup98Q6PFD9 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nup98Q6PFD9 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Nup98Q6PFD9 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nup98Q6PFD9 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nup98Q6PFD9 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nup98Q6PFD9 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nup98Q6PFD9 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nup98Q6PFD9 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nup98Q6PFD9 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Nup98Q6PFD9 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Nup98Q6PFD9 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC18.7■□□□□ 0.58
Nup98Q6PFD9 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Nup98Q6PFD9 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC18.7■□□□□ 0.58
Nup98Q6PFD9 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Nup98Q6PFD9 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nup98Q6PFD9 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nup98Q6PFD9 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Nup98Q6PFD9 Grk6-207ENSMUST00000225925 2769 ntBASIC18.7■□□□□ 0.58
Nup98Q6PFD9 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nup98Q6PFD9 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Nup98Q6PFD9 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Nup98Q6PFD9 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nup98Q6PFD9 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Nup98Q6PFD9 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nup98Q6PFD9 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC18.7■□□□□ 0.58
Nup98Q6PFD9 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Nup98Q6PFD9 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Nup98Q6PFD9 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nup98Q6PFD9 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nup98Q6PFD9 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nup98Q6PFD9 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nup98Q6PFD9 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC18.69■□□□□ 0.58
Nup98Q6PFD9 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nup98Q6PFD9 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Nup98Q6PFD9 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nup98Q6PFD9 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nup98Q6PFD9 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nup98Q6PFD9 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nup98Q6PFD9 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nup98Q6PFD9 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms