Protein–RNA interactions for Protein: Q62504

Spen, Msx2-interacting protein, mousemouse

Known RBP Predictions only

Length 3,644 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SpenQ62504 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SpenQ62504 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SpenQ62504 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SpenQ62504 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SpenQ62504 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC14.13□□□□□ -0.15
SpenQ62504 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.13□□□□□ -0.15
SpenQ62504 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.13□□□□□ -0.15
SpenQ62504 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SpenQ62504 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SpenQ62504 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SpenQ62504 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SpenQ62504 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SpenQ62504 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
SpenQ62504 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SpenQ62504 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
SpenQ62504 Gm43125-201ENSMUST00000201724 730 ntBASIC14.12□□□□□ -0.15
SpenQ62504 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.12□□□□□ -0.15
SpenQ62504 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SpenQ62504 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SpenQ62504 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SpenQ62504 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SpenQ62504 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SpenQ62504 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SpenQ62504 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SpenQ62504 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC14.12□□□□□ -0.15
SpenQ62504 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SpenQ62504 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SpenQ62504 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SpenQ62504 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SpenQ62504 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC14.12□□□□□ -0.15
SpenQ62504 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.12□□□□□ -0.15
SpenQ62504 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SpenQ62504 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SpenQ62504 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SpenQ62504 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SpenQ62504 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SpenQ62504 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SpenQ62504 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SpenQ62504 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SpenQ62504 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.11□□□□□ -0.15
SpenQ62504 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SpenQ62504 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.11□□□□□ -0.15
SpenQ62504 Rpph1-201ENSMUST00000175096 319 ntBASIC14.11□□□□□ -0.15
SpenQ62504 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
SpenQ62504 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC14.11□□□□□ -0.15
SpenQ62504 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.11□□□□□ -0.15
SpenQ62504 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SpenQ62504 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SpenQ62504 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SpenQ62504 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SpenQ62504 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.11□□□□□ -0.15
SpenQ62504 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SpenQ62504 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SpenQ62504 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SpenQ62504 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SpenQ62504 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SpenQ62504 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.11□□□□□ -0.15
SpenQ62504 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SpenQ62504 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SpenQ62504 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SpenQ62504 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SpenQ62504 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SpenQ62504 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SpenQ62504 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.11□□□□□ -0.15
SpenQ62504 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SpenQ62504 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SpenQ62504 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SpenQ62504 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.1□□□□□ -0.15
SpenQ62504 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SpenQ62504 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SpenQ62504 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SpenQ62504 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SpenQ62504 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SpenQ62504 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
SpenQ62504 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
SpenQ62504 Gm25287-201ENSMUST00000103846 110 ntBASIC14.1□□□□□ -0.15
SpenQ62504 Gm22918-201ENSMUST00000103855 110 ntBASIC14.1□□□□□ -0.15
SpenQ62504 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SpenQ62504 Thap2-203ENSMUST00000218989 527 ntBASIC14.1□□□□□ -0.15
SpenQ62504 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SpenQ62504 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SpenQ62504 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.1□□□□□ -0.15
SpenQ62504 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SpenQ62504 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SpenQ62504 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SpenQ62504 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SpenQ62504 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
SpenQ62504 Gm10253-201ENSMUST00000194270 940 ntBASIC14.1□□□□□ -0.15
SpenQ62504 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
SpenQ62504 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SpenQ62504 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.1□□□□□ -0.15
SpenQ62504 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
SpenQ62504 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SpenQ62504 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SpenQ62504 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SpenQ62504 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SpenQ62504 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SpenQ62504 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SpenQ62504 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SpenQ62504 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms