Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Gm10355-201ENSMUST00000097146 517 ntBASIC17.01■□□□□ 0.31
Shroom1Q5SX79 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shroom1Q5SX79 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Shroom1Q5SX79 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shroom1Q5SX79 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shroom1Q5SX79 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Shroom1Q5SX79 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shroom1Q5SX79 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Shroom1Q5SX79 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shroom1Q5SX79 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Shroom1Q5SX79 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shroom1Q5SX79 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shroom1Q5SX79 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shroom1Q5SX79 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17■□□□□ 0.31
Shroom1Q5SX79 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shroom1Q5SX79 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shroom1Q5SX79 Gm25990-201ENSMUST00000102440 86 ntBASIC17■□□□□ 0.31
Shroom1Q5SX79 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC17■□□□□ 0.31
Shroom1Q5SX79 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC17■□□□□ 0.31
Shroom1Q5SX79 Gm12497-201ENSMUST00000138778 237 ntBASIC17■□□□□ 0.31
Shroom1Q5SX79 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shroom1Q5SX79 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC17■□□□□ 0.31
Shroom1Q5SX79 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC17■□□□□ 0.31
Shroom1Q5SX79 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC17■□□□□ 0.31
Shroom1Q5SX79 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shroom1Q5SX79 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
Shroom1Q5SX79 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shroom1Q5SX79 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Shroom1Q5SX79 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shroom1Q5SX79 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shroom1Q5SX79 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Shroom1Q5SX79 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shroom1Q5SX79 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17■□□□□ 0.31
Shroom1Q5SX79 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shroom1Q5SX79 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Shroom1Q5SX79 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shroom1Q5SX79 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Shroom1Q5SX79 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shroom1Q5SX79 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Shroom1Q5SX79 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shroom1Q5SX79 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shroom1Q5SX79 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.99■□□□□ 0.31
Shroom1Q5SX79 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.99■□□□□ 0.31
Shroom1Q5SX79 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC16.99■□□□□ 0.31
Shroom1Q5SX79 Mir5126-201ENSMUST00000175513 77 ntBASIC16.99■□□□□ 0.31
Shroom1Q5SX79 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.99■□□□□ 0.31
Shroom1Q5SX79 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shroom1Q5SX79 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Shroom1Q5SX79 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shroom1Q5SX79 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shroom1Q5SX79 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shroom1Q5SX79 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shroom1Q5SX79 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Shroom1Q5SX79 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Shroom1Q5SX79 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Shroom1Q5SX79 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Shroom1Q5SX79 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shroom1Q5SX79 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shroom1Q5SX79 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shroom1Q5SX79 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shroom1Q5SX79 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Shroom1Q5SX79 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Shroom1Q5SX79 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Shroom1Q5SX79 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Shroom1Q5SX79 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Shroom1Q5SX79 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Shroom1Q5SX79 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Shroom1Q5SX79 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Shroom1Q5SX79 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Shroom1Q5SX79 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Shroom1Q5SX79 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC16.98■□□□□ 0.31
Shroom1Q5SX79 Gm7230-201ENSMUST00000173026 815 ntBASIC16.98■□□□□ 0.31
Shroom1Q5SX79 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.98■□□□□ 0.31
Shroom1Q5SX79 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC16.98■□□□□ 0.31
Shroom1Q5SX79 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Shroom1Q5SX79 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC16.98■□□□□ 0.31
Shroom1Q5SX79 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC16.98■□□□□ 0.31
Shroom1Q5SX79 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Shroom1Q5SX79 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Shroom1Q5SX79 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Shroom1Q5SX79 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Shroom1Q5SX79 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Shroom1Q5SX79 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Shroom1Q5SX79 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Shroom1Q5SX79 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Shroom1Q5SX79 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Shroom1Q5SX79 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Shroom1Q5SX79 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Shroom1Q5SX79 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Shroom1Q5SX79 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Shroom1Q5SX79 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Shroom1Q5SX79 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Shroom1Q5SX79 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Shroom1Q5SX79 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.97■□□□□ 0.31
Shroom1Q5SX79 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC16.97■□□□□ 0.31
Shroom1Q5SX79 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC16.97■□□□□ 0.31
Shroom1Q5SX79 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.97■□□□□ 0.31
Shroom1Q5SX79 Gm7506-201ENSMUST00000207758 815 ntBASIC16.97■□□□□ 0.31
Shroom1Q5SX79 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Shroom1Q5SX79 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms