Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC10.86□□□□□ -0.67
Trav3-1Q5R1I8 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC10.86□□□□□ -0.67
Trav3-1Q5R1I8 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3-1Q5R1I8 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3-1Q5R1I8 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3-1Q5R1I8 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Trav3-1Q5R1I8 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
Trav3-1Q5R1I8 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3-1Q5R1I8 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3-1Q5R1I8 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3-1Q5R1I8 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3-1Q5R1I8 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3-1Q5R1I8 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3-1Q5R1I8 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3-1Q5R1I8 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3-1Q5R1I8 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav3-1Q5R1I8 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC10.85□□□□□ -0.67
Trav3-1Q5R1I8 Tfap2a-203ENSMUST00000223869 2037 ntBASIC10.85□□□□□ -0.67
Trav3-1Q5R1I8 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-1Q5R1I8 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-1Q5R1I8 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-1Q5R1I8 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Trav3-1Q5R1I8 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
Trav3-1Q5R1I8 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-1Q5R1I8 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-1Q5R1I8 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-1Q5R1I8 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-1Q5R1I8 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-1Q5R1I8 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-1Q5R1I8 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC10.85□□□□□ -0.67
Trav3-1Q5R1I8 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-1Q5R1I8 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-1Q5R1I8 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-1Q5R1I8 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Trav3-1Q5R1I8 Gm16437-201ENSMUST00000025669 507 ntBASIC10.85□□□□□ -0.67
Trav3-1Q5R1I8 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-1Q5R1I8 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-1Q5R1I8 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Trav3-1Q5R1I8 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-1Q5R1I8 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-1Q5R1I8 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-1Q5R1I8 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-1Q5R1I8 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-1Q5R1I8 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-1Q5R1I8 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-1Q5R1I8 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-1Q5R1I8 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-1Q5R1I8 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-1Q5R1I8 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-1Q5R1I8 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-1Q5R1I8 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-1Q5R1I8 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav3-1Q5R1I8 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-1Q5R1I8 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-1Q5R1I8 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Trav3-1Q5R1I8 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-1Q5R1I8 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-1Q5R1I8 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-1Q5R1I8 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-1Q5R1I8 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Trav3-1Q5R1I8 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Trav3-1Q5R1I8 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC10.84□□□□□ -0.67
Trav3-1Q5R1I8 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Trav3-1Q5R1I8 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-1Q5R1I8 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-1Q5R1I8 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-1Q5R1I8 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-1Q5R1I8 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC10.84□□□□□ -0.67
Trav3-1Q5R1I8 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC10.84□□□□□ -0.67
Trav3-1Q5R1I8 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-1Q5R1I8 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-1Q5R1I8 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Trav3-1Q5R1I8 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC10.84□□□□□ -0.67
Trav3-1Q5R1I8 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-1Q5R1I8 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-1Q5R1I8 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-1Q5R1I8 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC10.84□□□□□ -0.67
Trav3-1Q5R1I8 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-1Q5R1I8 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-1Q5R1I8 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC10.84□□□□□ -0.67
Trav3-1Q5R1I8 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-1Q5R1I8 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC10.84□□□□□ -0.67
Trav3-1Q5R1I8 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-1Q5R1I8 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-1Q5R1I8 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-1Q5R1I8 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Trav3-1Q5R1I8 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-1Q5R1I8 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-1Q5R1I8 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Trav3-1Q5R1I8 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC10.84□□□□□ -0.67
Trav3-1Q5R1I8 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-1Q5R1I8 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav3-1Q5R1I8 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-1Q5R1I8 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-1Q5R1I8 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC10.83□□□□□ -0.68
Trav3-1Q5R1I8 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav3-1Q5R1I8 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC10.83□□□□□ -0.68
Trav3-1Q5R1I8 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Trav3-1Q5R1I8 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Trav3-1Q5R1I8 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms