Protein–RNA interactions for Protein: Q5R1I3

Trav7-2, T cell receptor alpha variable 7-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-2Q5R1I3 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Trav7-2Q5R1I3 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC11.95□□□□□ -0.5
Trav7-2Q5R1I3 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav7-2Q5R1I3 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav7-2Q5R1I3 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC11.95□□□□□ -0.5
Trav7-2Q5R1I3 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC11.95□□□□□ -0.5
Trav7-2Q5R1I3 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav7-2Q5R1I3 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav7-2Q5R1I3 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Trav7-2Q5R1I3 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav7-2Q5R1I3 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Trav7-2Q5R1I3 Gm8839-201ENSMUST00000121279 1645 ntBASIC11.95□□□□□ -0.5
Trav7-2Q5R1I3 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav7-2Q5R1I3 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav7-2Q5R1I3 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav7-2Q5R1I3 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav7-2Q5R1I3 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC11.95□□□□□ -0.5
Trav7-2Q5R1I3 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav7-2Q5R1I3 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav7-2Q5R1I3 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Trav7-2Q5R1I3 Actl10-202ENSMUST00000226583 1501 ntBASIC11.95□□□□□ -0.5
Trav7-2Q5R1I3 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav7-2Q5R1I3 Gm14026-201ENSMUST00000120625 1789 ntBASIC11.95□□□□□ -0.5
Trav7-2Q5R1I3 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC11.94□□□□□ -0.5
Trav7-2Q5R1I3 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav7-2Q5R1I3 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav7-2Q5R1I3 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav7-2Q5R1I3 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav7-2Q5R1I3 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav7-2Q5R1I3 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav7-2Q5R1I3 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav7-2Q5R1I3 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav7-2Q5R1I3 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trav7-2Q5R1I3 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC11.94□□□□□ -0.5
Trav7-2Q5R1I3 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav7-2Q5R1I3 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav7-2Q5R1I3 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav7-2Q5R1I3 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav7-2Q5R1I3 Gm27389-201ENSMUST00000183622 195 ntBASIC11.94□□□□□ -0.5
Trav7-2Q5R1I3 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC11.94□□□□□ -0.5
Trav7-2Q5R1I3 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC11.94□□□□□ -0.5
Trav7-2Q5R1I3 Gm18101-201ENSMUST00000215769 548 ntBASIC11.94□□□□□ -0.5
Trav7-2Q5R1I3 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav7-2Q5R1I3 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav7-2Q5R1I3 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Trav7-2Q5R1I3 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav7-2Q5R1I3 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav7-2Q5R1I3 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav7-2Q5R1I3 AC093043.3-201ENSMUST00000226531 2273 ntBASIC11.94□□□□□ -0.5
Trav7-2Q5R1I3 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav7-2Q5R1I3 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trav7-2Q5R1I3 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav7-2Q5R1I3 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav7-2Q5R1I3 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC11.93□□□□□ -0.5
Trav7-2Q5R1I3 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav7-2Q5R1I3 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav7-2Q5R1I3 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav7-2Q5R1I3 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trav7-2Q5R1I3 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav7-2Q5R1I3 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav7-2Q5R1I3 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trav7-2Q5R1I3 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav7-2Q5R1I3 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav7-2Q5R1I3 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav7-2Q5R1I3 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav7-2Q5R1I3 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav7-2Q5R1I3 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC11.93□□□□□ -0.5
Trav7-2Q5R1I3 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC11.93□□□□□ -0.5
Trav7-2Q5R1I3 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC11.93□□□□□ -0.5
Trav7-2Q5R1I3 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav7-2Q5R1I3 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav7-2Q5R1I3 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav7-2Q5R1I3 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav7-2Q5R1I3 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav7-2Q5R1I3 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav7-2Q5R1I3 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav7-2Q5R1I3 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav7-2Q5R1I3 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav7-2Q5R1I3 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trav7-2Q5R1I3 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav7-2Q5R1I3 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Trav7-2Q5R1I3 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav7-2Q5R1I3 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trav7-2Q5R1I3 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav7-2Q5R1I3 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav7-2Q5R1I3 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav7-2Q5R1I3 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav7-2Q5R1I3 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav7-2Q5R1I3 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav7-2Q5R1I3 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav7-2Q5R1I3 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav7-2Q5R1I3 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav7-2Q5R1I3 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC11.92□□□□□ -0.5
Trav7-2Q5R1I3 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC11.92□□□□□ -0.5
Trav7-2Q5R1I3 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav7-2Q5R1I3 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav7-2Q5R1I3 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav7-2Q5R1I3 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav7-2Q5R1I3 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Trav7-2Q5R1I3 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms