Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6d-4Q5R1I0 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6d-4Q5R1I0 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6d-4Q5R1I0 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6d-4Q5R1I0 Gm26917-202ENSMUST00000192833 3329 ntBASIC13.42□□□□□ -0.26
Trav6d-4Q5R1I0 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6d-4Q5R1I0 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC13.42□□□□□ -0.26
Trav6d-4Q5R1I0 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6d-4Q5R1I0 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trav6d-4Q5R1I0 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC13.42□□□□□ -0.26
Trav6d-4Q5R1I0 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC13.42□□□□□ -0.26
Trav6d-4Q5R1I0 Gm4459-201ENSMUST00000118750 468 ntBASIC13.42□□□□□ -0.26
Trav6d-4Q5R1I0 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC13.42□□□□□ -0.26
Trav6d-4Q5R1I0 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC13.42□□□□□ -0.26
Trav6d-4Q5R1I0 Gm6296-201ENSMUST00000222599 943 ntBASIC13.42□□□□□ -0.26
Trav6d-4Q5R1I0 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6d-4Q5R1I0 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6d-4Q5R1I0 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6d-4Q5R1I0 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6d-4Q5R1I0 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC13.42□□□□□ -0.26
Trav6d-4Q5R1I0 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6d-4Q5R1I0 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6d-4Q5R1I0 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6d-4Q5R1I0 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Trav6d-4Q5R1I0 Haglr-201ENSMUST00000100000 2085 ntBASIC13.41□□□□□ -0.26
Trav6d-4Q5R1I0 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6d-4Q5R1I0 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6d-4Q5R1I0 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6d-4Q5R1I0 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC13.41□□□□□ -0.26
Trav6d-4Q5R1I0 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Trav6d-4Q5R1I0 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Trav6d-4Q5R1I0 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Trav6d-4Q5R1I0 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Trav6d-4Q5R1I0 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6d-4Q5R1I0 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6d-4Q5R1I0 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6d-4Q5R1I0 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC13.41□□□□□ -0.26
Trav6d-4Q5R1I0 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6d-4Q5R1I0 Gm44357-201ENSMUST00000195897 142 ntBASIC13.41□□□□□ -0.26
Trav6d-4Q5R1I0 Gm19658-201ENSMUST00000196231 138 ntBASIC13.41□□□□□ -0.26
Trav6d-4Q5R1I0 Gm44367-201ENSMUST00000196836 138 ntBASIC13.41□□□□□ -0.26
Trav6d-4Q5R1I0 Gm44350-201ENSMUST00000197197 138 ntBASIC13.41□□□□□ -0.26
Trav6d-4Q5R1I0 Gm44390-201ENSMUST00000197533 144 ntBASIC13.41□□□□□ -0.26
Trav6d-4Q5R1I0 Gm44313-201ENSMUST00000198018 138 ntBASIC13.41□□□□□ -0.26
Trav6d-4Q5R1I0 Gm44486-201ENSMUST00000198508 138 ntBASIC13.41□□□□□ -0.26
Trav6d-4Q5R1I0 Gm44314-201ENSMUST00000199263 138 ntBASIC13.41□□□□□ -0.26
Trav6d-4Q5R1I0 Gm44394-201ENSMUST00000199558 138 ntBASIC13.41□□□□□ -0.26
Trav6d-4Q5R1I0 Gm44484-201ENSMUST00000199873 138 ntBASIC13.41□□□□□ -0.26
Trav6d-4Q5R1I0 Gm44466-201ENSMUST00000200264 138 ntBASIC13.41□□□□□ -0.26
Trav6d-4Q5R1I0 Gm44359-201ENSMUST00000200671 138 ntBASIC13.41□□□□□ -0.26
Trav6d-4Q5R1I0 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC13.41□□□□□ -0.26
Trav6d-4Q5R1I0 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6d-4Q5R1I0 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC13.41□□□□□ -0.26
Trav6d-4Q5R1I0 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Trav6d-4Q5R1I0 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6d-4Q5R1I0 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
Trav6d-4Q5R1I0 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6d-4Q5R1I0 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6d-4Q5R1I0 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6d-4Q5R1I0 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6d-4Q5R1I0 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6d-4Q5R1I0 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
Trav6d-4Q5R1I0 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6d-4Q5R1I0 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC13.4□□□□□ -0.26
Trav6d-4Q5R1I0 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6d-4Q5R1I0 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6d-4Q5R1I0 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6d-4Q5R1I0 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6d-4Q5R1I0 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6d-4Q5R1I0 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
Trav6d-4Q5R1I0 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6d-4Q5R1I0 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6d-4Q5R1I0 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav6d-4Q5R1I0 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6d-4Q5R1I0 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6d-4Q5R1I0 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav6d-4Q5R1I0 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6d-4Q5R1I0 Gm18856-201ENSMUST00000178096 1374 ntBASIC13.4□□□□□ -0.26
Trav6d-4Q5R1I0 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6d-4Q5R1I0 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6d-4Q5R1I0 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6d-4Q5R1I0 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6d-4Q5R1I0 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6d-4Q5R1I0 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6d-4Q5R1I0 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6d-4Q5R1I0 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Trav6d-4Q5R1I0 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6d-4Q5R1I0 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6d-4Q5R1I0 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6d-4Q5R1I0 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6d-4Q5R1I0 Gm45244-201ENSMUST00000211328 2200 ntBASIC13.39□□□□□ -0.27
Trav6d-4Q5R1I0 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6d-4Q5R1I0 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6d-4Q5R1I0 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC13.39□□□□□ -0.27
Trav6d-4Q5R1I0 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trav6d-4Q5R1I0 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trav6d-4Q5R1I0 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6d-4Q5R1I0 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6d-4Q5R1I0 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC13.39□□□□□ -0.27
Trav6d-4Q5R1I0 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms