Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Q3U1D9 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC13.87□□□□□ -0.19
Q3U1D9 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC13.87□□□□□ -0.19
Q3U1D9 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC13.87□□□□□ -0.19
Q3U1D9 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Q3U1D9 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC13.87□□□□□ -0.19
Q3U1D9 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC13.87□□□□□ -0.19
Q3U1D9 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Q3U1D9 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Q3U1D9 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Q3U1D9 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Q3U1D9 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Q3U1D9 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Q3U1D9 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Q3U1D9 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Q3U1D9 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Q3U1D9 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Q3U1D9 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC13.86□□□□□ -0.19
Q3U1D9 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Q3U1D9 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Q3U1D9 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Q3U1D9 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Q3U1D9 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Q3U1D9 Gm15743-202ENSMUST00000182690 1901 ntBASIC13.86□□□□□ -0.19
Q3U1D9 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC13.86□□□□□ -0.19
Q3U1D9 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Q3U1D9 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
Q3U1D9 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Q3U1D9 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Q3U1D9 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Q3U1D9 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC13.86□□□□□ -0.19
Q3U1D9 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC13.86□□□□□ -0.19
Q3U1D9 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC13.86□□□□□ -0.19
Q3U1D9 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Q3U1D9 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC13.86□□□□□ -0.19
Q3U1D9 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC13.86□□□□□ -0.19
Q3U1D9 AW822252-206ENSMUST00000208904 237 ntBASIC13.86□□□□□ -0.19
Q3U1D9 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Q3U1D9 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Q3U1D9 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Q3U1D9 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Q3U1D9 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC13.86□□□□□ -0.19
Q3U1D9 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Q3U1D9 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Q3U1D9 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Q3U1D9 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Q3U1D9 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Q3U1D9 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Q3U1D9 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Q3U1D9 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC13.85□□□□□ -0.19
Q3U1D9 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Q3U1D9 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Q3U1D9 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Q3U1D9 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC13.85□□□□□ -0.19
Q3U1D9 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Q3U1D9 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC13.85□□□□□ -0.19
Q3U1D9 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Q3U1D9 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Q3U1D9 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Q3U1D9 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Q3U1D9 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Q3U1D9 Gm37500-201ENSMUST00000192059 1443 ntBASIC13.85□□□□□ -0.19
Q3U1D9 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Q3U1D9 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC13.85□□□□□ -0.19
Q3U1D9 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Q3U1D9 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC13.85□□□□□ -0.19
Q3U1D9 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC13.85□□□□□ -0.19
Q3U1D9 Mir5126-201ENSMUST00000175513 77 ntBASIC13.85□□□□□ -0.19
Q3U1D9 Gm6089-201ENSMUST00000197666 938 ntBASIC13.85□□□□□ -0.19
Q3U1D9 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Q3U1D9 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Q3U1D9 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC13.85□□□□□ -0.19
Q3U1D9 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Q3U1D9 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Q3U1D9 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Q3U1D9 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Q3U1D9 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Q3U1D9 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Q3U1D9 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Q3U1D9 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Q3U1D9 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Q3U1D9 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Q3U1D9 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.85□□□□□ -0.19
Q3U1D9 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Q3U1D9 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC13.85□□□□□ -0.19
Q3U1D9 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Q3U1D9 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Q3U1D9 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Q3U1D9 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Q3U1D9 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Q3U1D9 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Q3U1D9 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Q3U1D9 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Q3U1D9 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Q3U1D9 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Q3U1D9 Gm4609-201ENSMUST00000106443 1002 ntBASIC13.84□□□□□ -0.19
Q3U1D9 Gm5138-201ENSMUST00000113842 1002 ntBASIC13.84□□□□□ -0.19
Q3U1D9 Gm7222-201ENSMUST00000117512 906 ntBASIC13.84□□□□□ -0.19
Q3U1D9 Gm15191-201ENSMUST00000117933 1000 ntBASIC13.84□□□□□ -0.19
Q3U1D9 Gm12182-201ENSMUST00000118655 1008 ntBASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms